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A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation
Modeling reactivity with chemical reaction networks could yield fundamental mechanistic understanding that would expedite the development of processes and technologies for energy storage, medicine, catalysis, and more. Thus far, reaction networks have been limited in size by chemically inconsistent...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179555/ https://www.ncbi.nlm.nih.gov/pubmed/34163740 http://dx.doi.org/10.1039/d0sc05647b |
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author | Blau, Samuel M. Patel, Hetal D. Spotte-Smith, Evan Walter Clark Xie, Xiaowei Dwaraknath, Shyam Persson, Kristin A. |
author_facet | Blau, Samuel M. Patel, Hetal D. Spotte-Smith, Evan Walter Clark Xie, Xiaowei Dwaraknath, Shyam Persson, Kristin A. |
author_sort | Blau, Samuel M. |
collection | PubMed |
description | Modeling reactivity with chemical reaction networks could yield fundamental mechanistic understanding that would expedite the development of processes and technologies for energy storage, medicine, catalysis, and more. Thus far, reaction networks have been limited in size by chemically inconsistent graph representations of multi-reactant reactions (e.g. A + B → C) that cannot enforce stoichiometric constraints, precluding the use of optimized shortest-path algorithms. Here, we report a chemically consistent graph architecture that overcomes these limitations using a novel multi-reactant representation and iterative cost-solving procedure. Our approach enables the identification of all low-cost pathways to desired products in massive reaction networks containing reactions of any stoichiometry, allowing for the investigation of vastly more complex systems than previously possible. Leveraging our architecture, we construct the first ever electrochemical reaction network from first-principles thermodynamic calculations to describe the formation of the Li-ion solid electrolyte interphase (SEI), which is critical for passivation of the negative electrode. Using this network comprised of nearly 6000 species and 4.5 million reactions, we interrogate the formation of a key SEI component, lithium ethylene dicarbonate. We automatically identify previously proposed mechanisms as well as multiple novel pathways containing counter-intuitive reactions that have not, to our knowledge, been reported in the literature. We envision that our framework and data-driven methodology will facilitate efforts to engineer the composition-related properties of the SEI – or of any complex chemical process – through selective control of reactivity. |
format | Online Article Text |
id | pubmed-8179555 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81795552021-06-22 A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation Blau, Samuel M. Patel, Hetal D. Spotte-Smith, Evan Walter Clark Xie, Xiaowei Dwaraknath, Shyam Persson, Kristin A. Chem Sci Chemistry Modeling reactivity with chemical reaction networks could yield fundamental mechanistic understanding that would expedite the development of processes and technologies for energy storage, medicine, catalysis, and more. Thus far, reaction networks have been limited in size by chemically inconsistent graph representations of multi-reactant reactions (e.g. A + B → C) that cannot enforce stoichiometric constraints, precluding the use of optimized shortest-path algorithms. Here, we report a chemically consistent graph architecture that overcomes these limitations using a novel multi-reactant representation and iterative cost-solving procedure. Our approach enables the identification of all low-cost pathways to desired products in massive reaction networks containing reactions of any stoichiometry, allowing for the investigation of vastly more complex systems than previously possible. Leveraging our architecture, we construct the first ever electrochemical reaction network from first-principles thermodynamic calculations to describe the formation of the Li-ion solid electrolyte interphase (SEI), which is critical for passivation of the negative electrode. Using this network comprised of nearly 6000 species and 4.5 million reactions, we interrogate the formation of a key SEI component, lithium ethylene dicarbonate. We automatically identify previously proposed mechanisms as well as multiple novel pathways containing counter-intuitive reactions that have not, to our knowledge, been reported in the literature. We envision that our framework and data-driven methodology will facilitate efforts to engineer the composition-related properties of the SEI – or of any complex chemical process – through selective control of reactivity. The Royal Society of Chemistry 2021-02-24 /pmc/articles/PMC8179555/ /pubmed/34163740 http://dx.doi.org/10.1039/d0sc05647b Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Blau, Samuel M. Patel, Hetal D. Spotte-Smith, Evan Walter Clark Xie, Xiaowei Dwaraknath, Shyam Persson, Kristin A. A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title | A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title_full | A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title_fullStr | A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title_full_unstemmed | A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title_short | A chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
title_sort | chemically consistent graph architecture for massive reaction networks applied to solid-electrolyte interphase formation |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179555/ https://www.ncbi.nlm.nih.gov/pubmed/34163740 http://dx.doi.org/10.1039/d0sc05647b |
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