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Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii

OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in paralle...

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Autores principales: García-Salguero, Cristina, Culebras, Esther, Alvarez-Buylla, Adela, Rodríguez-Avial, Icíar, Delgado-Iribarren, Alberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedad Española de Quimioterapia 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179950/
https://www.ncbi.nlm.nih.gov/pubmed/33830714
http://dx.doi.org/10.37201/req/142.2020
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author García-Salguero, Cristina
Culebras, Esther
Alvarez-Buylla, Adela
Rodríguez-Avial, Icíar
Delgado-Iribarren, Alberto
author_facet García-Salguero, Cristina
Culebras, Esther
Alvarez-Buylla, Adela
Rodríguez-Avial, Icíar
Delgado-Iribarren, Alberto
author_sort García-Salguero, Cristina
collection PubMed
description OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in parallel by MALDI-TOF MS and rep-PCR and the spectra obtained were compared with each other and with the results obtained by pulsed field gel electrophoresis (PFGE). Isolates with a similarity equal to or greater than 87% were considered to be part of the same clonal group RESULTS: The analysis of the 21 isolates included in the study, resulted in 8 clonal groups using PFGE, 3 groups by MALDI-TOF MS and 7 groups by rep-PCR analysis. The isolates that formed the different groups by the 3 techniques used were totally different, so it can be concluded that there is no equivalence between the results obtained with the three typing methods used. CONCLUSIONS: Despite its simplicity, neither MALDI-TOF MS nor rep-PCR can at this time replace PFGE for the epidemio-logical study of A. baumannii.
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spelling pubmed-81799502021-06-17 Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii García-Salguero, Cristina Culebras, Esther Alvarez-Buylla, Adela Rodríguez-Avial, Icíar Delgado-Iribarren, Alberto Rev Esp Quimioter Original OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in parallel by MALDI-TOF MS and rep-PCR and the spectra obtained were compared with each other and with the results obtained by pulsed field gel electrophoresis (PFGE). Isolates with a similarity equal to or greater than 87% were considered to be part of the same clonal group RESULTS: The analysis of the 21 isolates included in the study, resulted in 8 clonal groups using PFGE, 3 groups by MALDI-TOF MS and 7 groups by rep-PCR analysis. The isolates that formed the different groups by the 3 techniques used were totally different, so it can be concluded that there is no equivalence between the results obtained with the three typing methods used. CONCLUSIONS: Despite its simplicity, neither MALDI-TOF MS nor rep-PCR can at this time replace PFGE for the epidemio-logical study of A. baumannii. Sociedad Española de Quimioterapia 2021-04-08 2021 /pmc/articles/PMC8179950/ /pubmed/33830714 http://dx.doi.org/10.37201/req/142.2020 Text en © The Author 2021 https://creativecommons.org/licenses/by-nc/4.0/Published by Sociedad Española de Quimioterapia. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)(https://creativecommons.org/licenses/by-nc/4.0/).
spellingShingle Original
García-Salguero, Cristina
Culebras, Esther
Alvarez-Buylla, Adela
Rodríguez-Avial, Icíar
Delgado-Iribarren, Alberto
Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title_full Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title_fullStr Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title_full_unstemmed Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title_short Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
title_sort utilidad de maldi-tof y rep-pcr frente a pfge para el estudio epidemiológico de acinetobacter baumannii
topic Original
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179950/
https://www.ncbi.nlm.nih.gov/pubmed/33830714
http://dx.doi.org/10.37201/req/142.2020
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