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Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii
OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in paralle...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedad Española de Quimioterapia
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179950/ https://www.ncbi.nlm.nih.gov/pubmed/33830714 http://dx.doi.org/10.37201/req/142.2020 |
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author | García-Salguero, Cristina Culebras, Esther Alvarez-Buylla, Adela Rodríguez-Avial, Icíar Delgado-Iribarren, Alberto |
author_facet | García-Salguero, Cristina Culebras, Esther Alvarez-Buylla, Adela Rodríguez-Avial, Icíar Delgado-Iribarren, Alberto |
author_sort | García-Salguero, Cristina |
collection | PubMed |
description | OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in parallel by MALDI-TOF MS and rep-PCR and the spectra obtained were compared with each other and with the results obtained by pulsed field gel electrophoresis (PFGE). Isolates with a similarity equal to or greater than 87% were considered to be part of the same clonal group RESULTS: The analysis of the 21 isolates included in the study, resulted in 8 clonal groups using PFGE, 3 groups by MALDI-TOF MS and 7 groups by rep-PCR analysis. The isolates that formed the different groups by the 3 techniques used were totally different, so it can be concluded that there is no equivalence between the results obtained with the three typing methods used. CONCLUSIONS: Despite its simplicity, neither MALDI-TOF MS nor rep-PCR can at this time replace PFGE for the epidemio-logical study of A. baumannii. |
format | Online Article Text |
id | pubmed-8179950 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Sociedad Española de Quimioterapia |
record_format | MEDLINE/PubMed |
spelling | pubmed-81799502021-06-17 Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii García-Salguero, Cristina Culebras, Esther Alvarez-Buylla, Adela Rodríguez-Avial, Icíar Delgado-Iribarren, Alberto Rev Esp Quimioter Original OBJECTIVE: To evaluate the ability of MALDI-TOF MS and rep-PCR to discriminate Acinetobacter baumannii clones. MATERIAL AND METHODS: A total of 21 strains of A. baumannii with different epidemiological and phenotipycal characteristics were included in the study. All isolates were analyzed in parallel by MALDI-TOF MS and rep-PCR and the spectra obtained were compared with each other and with the results obtained by pulsed field gel electrophoresis (PFGE). Isolates with a similarity equal to or greater than 87% were considered to be part of the same clonal group RESULTS: The analysis of the 21 isolates included in the study, resulted in 8 clonal groups using PFGE, 3 groups by MALDI-TOF MS and 7 groups by rep-PCR analysis. The isolates that formed the different groups by the 3 techniques used were totally different, so it can be concluded that there is no equivalence between the results obtained with the three typing methods used. CONCLUSIONS: Despite its simplicity, neither MALDI-TOF MS nor rep-PCR can at this time replace PFGE for the epidemio-logical study of A. baumannii. Sociedad Española de Quimioterapia 2021-04-08 2021 /pmc/articles/PMC8179950/ /pubmed/33830714 http://dx.doi.org/10.37201/req/142.2020 Text en © The Author 2021 https://creativecommons.org/licenses/by-nc/4.0/Published by Sociedad Española de Quimioterapia. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)(https://creativecommons.org/licenses/by-nc/4.0/). |
spellingShingle | Original García-Salguero, Cristina Culebras, Esther Alvarez-Buylla, Adela Rodríguez-Avial, Icíar Delgado-Iribarren, Alberto Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title | Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title_full | Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title_fullStr | Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title_full_unstemmed | Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title_short | Utilidad de MALDI-TOF y REP-PCR frente a PFGE para el estudio epidemiológico de Acinetobacter baumannii |
title_sort | utilidad de maldi-tof y rep-pcr frente a pfge para el estudio epidemiológico de acinetobacter baumannii |
topic | Original |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179950/ https://www.ncbi.nlm.nih.gov/pubmed/33830714 http://dx.doi.org/10.37201/req/142.2020 |
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