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COVID-index: A texture-based approach to classifying lung lesions based on CT images

COVID-19 is an infectious disease caused by a newly discovered type of coronavirus called SARS-CoV-2. Since the discovery of this disease in late 2019, COVID-19 has become a worldwide concern, mainly due to its high degree of contagion. As of April 2021, the number of confirmed cases of COVID-19 rep...

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Autores principales: de Carvalho Brito, Vitória, dos Santos, Patrick Ryan Sales, de Sales Carvalho, Nonato Rodrigues, de Carvalho Filho, Antonio Oseas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8180348/
https://www.ncbi.nlm.nih.gov/pubmed/34121775
http://dx.doi.org/10.1016/j.patcog.2021.108083
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author de Carvalho Brito, Vitória
dos Santos, Patrick Ryan Sales
de Sales Carvalho, Nonato Rodrigues
de Carvalho Filho, Antonio Oseas
author_facet de Carvalho Brito, Vitória
dos Santos, Patrick Ryan Sales
de Sales Carvalho, Nonato Rodrigues
de Carvalho Filho, Antonio Oseas
author_sort de Carvalho Brito, Vitória
collection PubMed
description COVID-19 is an infectious disease caused by a newly discovered type of coronavirus called SARS-CoV-2. Since the discovery of this disease in late 2019, COVID-19 has become a worldwide concern, mainly due to its high degree of contagion. As of April 2021, the number of confirmed cases of COVID-19 reported to the World Health Organization has already exceeded 135 million worldwide, while the number of deaths exceeds 2.9 million. Due to the impacts of the disease, efforts in the literature have intensified in terms of studying approaches aiming to detect COVID-19, with a focus on supporting and facilitating the process of disease diagnosis. This work proposes the application of texture descriptors based on phylogenetic relationships between species to characterize segmented CT volumes, and the subsequent classification of regions into COVID-19, solid lesion or healthy tissue. To evaluate our method, we use images from three different datasets. The results are promising, with an accuracy of 99.93%, a recall of 99.93%, a precision of 99.93%, an F1-score of 99.93%, and an AUC of 0.997. We present a robust, simple, and efficient method that can be easily applied to 2D and/or 3D images without limitations on their dimensionality.
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spelling pubmed-81803482021-06-07 COVID-index: A texture-based approach to classifying lung lesions based on CT images de Carvalho Brito, Vitória dos Santos, Patrick Ryan Sales de Sales Carvalho, Nonato Rodrigues de Carvalho Filho, Antonio Oseas Pattern Recognit Article COVID-19 is an infectious disease caused by a newly discovered type of coronavirus called SARS-CoV-2. Since the discovery of this disease in late 2019, COVID-19 has become a worldwide concern, mainly due to its high degree of contagion. As of April 2021, the number of confirmed cases of COVID-19 reported to the World Health Organization has already exceeded 135 million worldwide, while the number of deaths exceeds 2.9 million. Due to the impacts of the disease, efforts in the literature have intensified in terms of studying approaches aiming to detect COVID-19, with a focus on supporting and facilitating the process of disease diagnosis. This work proposes the application of texture descriptors based on phylogenetic relationships between species to characterize segmented CT volumes, and the subsequent classification of regions into COVID-19, solid lesion or healthy tissue. To evaluate our method, we use images from three different datasets. The results are promising, with an accuracy of 99.93%, a recall of 99.93%, a precision of 99.93%, an F1-score of 99.93%, and an AUC of 0.997. We present a robust, simple, and efficient method that can be easily applied to 2D and/or 3D images without limitations on their dimensionality. Elsevier Ltd. 2021-11 2021-06-06 /pmc/articles/PMC8180348/ /pubmed/34121775 http://dx.doi.org/10.1016/j.patcog.2021.108083 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
de Carvalho Brito, Vitória
dos Santos, Patrick Ryan Sales
de Sales Carvalho, Nonato Rodrigues
de Carvalho Filho, Antonio Oseas
COVID-index: A texture-based approach to classifying lung lesions based on CT images
title COVID-index: A texture-based approach to classifying lung lesions based on CT images
title_full COVID-index: A texture-based approach to classifying lung lesions based on CT images
title_fullStr COVID-index: A texture-based approach to classifying lung lesions based on CT images
title_full_unstemmed COVID-index: A texture-based approach to classifying lung lesions based on CT images
title_short COVID-index: A texture-based approach to classifying lung lesions based on CT images
title_sort covid-index: a texture-based approach to classifying lung lesions based on ct images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8180348/
https://www.ncbi.nlm.nih.gov/pubmed/34121775
http://dx.doi.org/10.1016/j.patcog.2021.108083
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