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Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data

The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) a...

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Autores principales: Fricke, Maximilian, Thomas, Noel W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182799/
https://www.ncbi.nlm.nih.gov/pubmed/34096525
http://dx.doi.org/10.1107/S2052520621002717
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author Fricke, Maximilian
Thomas, Noel W.
author_facet Fricke, Maximilian
Thomas, Noel W.
author_sort Fricke, Maximilian
collection PubMed
description The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) and c (PC), together with an angle parameter α(PC). In β-quartz, α(PC) has a fixed value of 90°. For quartz, the temperature evolution of parameters for the pseudocubes and the silicon ion network is established by reference to the structural refinements of Antao [Acta Cryst. (2016), B72, 249–262]. In α-quartz, the curve-fitting employed to express the non-linear temperature dependence of pseudocubic length and Si parameters exploits the model of a first-order Landau phase transition utilized by Grimm & Dorner [J. Phys. Chem. Solids (1975) ▸, 36, 407–413]. Since values of tetrahedral tilt angles about 〈100〉 axes also result from the pseudocubic transformation, a curve for the observed non-monotonic variation of α(PC) with temperature can also be fitted. Reverse transformation of curve-derived values of [Si+PC] parameters to crystallographic parameters a, c, x (Si), x (O), y (O) and z (O) at interpolated or extrapolated temperatures is demonstrated for α-quartz. A reverse transformation to crystallographic parameters a, c, x (O) is likewise carried out for β-quartz. This capability corresponds to a method of structure prediction. Support for the applicability of the approach to GeO(2) is provided by analysing the structural refinements of Haines et al. [J. Solid State Chem. (2002) ▸, 166, 434–441]. An analysis of trends in tetrahedral distortion and tilt angle in α-quartz and GeO(2) supports the view that GeO(2) is a good model for quartz at high pressure.
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spelling pubmed-81827992021-06-22 Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data Fricke, Maximilian Thomas, Noel W. Acta Crystallogr B Struct Sci Cryst Eng Mater Research Papers The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) and c (PC), together with an angle parameter α(PC). In β-quartz, α(PC) has a fixed value of 90°. For quartz, the temperature evolution of parameters for the pseudocubes and the silicon ion network is established by reference to the structural refinements of Antao [Acta Cryst. (2016), B72, 249–262]. In α-quartz, the curve-fitting employed to express the non-linear temperature dependence of pseudocubic length and Si parameters exploits the model of a first-order Landau phase transition utilized by Grimm & Dorner [J. Phys. Chem. Solids (1975) ▸, 36, 407–413]. Since values of tetrahedral tilt angles about 〈100〉 axes also result from the pseudocubic transformation, a curve for the observed non-monotonic variation of α(PC) with temperature can also be fitted. Reverse transformation of curve-derived values of [Si+PC] parameters to crystallographic parameters a, c, x (Si), x (O), y (O) and z (O) at interpolated or extrapolated temperatures is demonstrated for α-quartz. A reverse transformation to crystallographic parameters a, c, x (O) is likewise carried out for β-quartz. This capability corresponds to a method of structure prediction. Support for the applicability of the approach to GeO(2) is provided by analysing the structural refinements of Haines et al. [J. Solid State Chem. (2002) ▸, 166, 434–441]. An analysis of trends in tetrahedral distortion and tilt angle in α-quartz and GeO(2) supports the view that GeO(2) is a good model for quartz at high pressure. International Union of Crystallography 2021-05-20 /pmc/articles/PMC8182799/ /pubmed/34096525 http://dx.doi.org/10.1107/S2052520621002717 Text en © Fricke and Thomas 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Fricke, Maximilian
Thomas, Noel W.
Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title_full Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title_fullStr Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title_full_unstemmed Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title_short Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
title_sort modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182799/
https://www.ncbi.nlm.nih.gov/pubmed/34096525
http://dx.doi.org/10.1107/S2052520621002717
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