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Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data
The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) a...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182799/ https://www.ncbi.nlm.nih.gov/pubmed/34096525 http://dx.doi.org/10.1107/S2052520621002717 |
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author | Fricke, Maximilian Thomas, Noel W. |
author_facet | Fricke, Maximilian Thomas, Noel W. |
author_sort | Fricke, Maximilian |
collection | PubMed |
description | The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) and c (PC), together with an angle parameter α(PC). In β-quartz, α(PC) has a fixed value of 90°. For quartz, the temperature evolution of parameters for the pseudocubes and the silicon ion network is established by reference to the structural refinements of Antao [Acta Cryst. (2016), B72, 249–262]. In α-quartz, the curve-fitting employed to express the non-linear temperature dependence of pseudocubic length and Si parameters exploits the model of a first-order Landau phase transition utilized by Grimm & Dorner [J. Phys. Chem. Solids (1975) ▸, 36, 407–413]. Since values of tetrahedral tilt angles about 〈100〉 axes also result from the pseudocubic transformation, a curve for the observed non-monotonic variation of α(PC) with temperature can also be fitted. Reverse transformation of curve-derived values of [Si+PC] parameters to crystallographic parameters a, c, x (Si), x (O), y (O) and z (O) at interpolated or extrapolated temperatures is demonstrated for α-quartz. A reverse transformation to crystallographic parameters a, c, x (O) is likewise carried out for β-quartz. This capability corresponds to a method of structure prediction. Support for the applicability of the approach to GeO(2) is provided by analysing the structural refinements of Haines et al. [J. Solid State Chem. (2002) ▸, 166, 434–441]. An analysis of trends in tetrahedral distortion and tilt angle in α-quartz and GeO(2) supports the view that GeO(2) is a good model for quartz at high pressure. |
format | Online Article Text |
id | pubmed-8182799 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-81827992021-06-22 Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data Fricke, Maximilian Thomas, Noel W. Acta Crystallogr B Struct Sci Cryst Eng Mater Research Papers The pseudocubic (PC) parameterization of O(4) tetrahedra [Reifenberg & Thomas (2018 ▸). Acta Cryst. B74, 165–181] is applied to quartz (SiO(2)) and its structural analogue germanium dioxide (GeO(2)). In α-quartz and GeO(2), the pseudocubes are defined by three length parameters, a (PC), b (PC) and c (PC), together with an angle parameter α(PC). In β-quartz, α(PC) has a fixed value of 90°. For quartz, the temperature evolution of parameters for the pseudocubes and the silicon ion network is established by reference to the structural refinements of Antao [Acta Cryst. (2016), B72, 249–262]. In α-quartz, the curve-fitting employed to express the non-linear temperature dependence of pseudocubic length and Si parameters exploits the model of a first-order Landau phase transition utilized by Grimm & Dorner [J. Phys. Chem. Solids (1975) ▸, 36, 407–413]. Since values of tetrahedral tilt angles about 〈100〉 axes also result from the pseudocubic transformation, a curve for the observed non-monotonic variation of α(PC) with temperature can also be fitted. Reverse transformation of curve-derived values of [Si+PC] parameters to crystallographic parameters a, c, x (Si), x (O), y (O) and z (O) at interpolated or extrapolated temperatures is demonstrated for α-quartz. A reverse transformation to crystallographic parameters a, c, x (O) is likewise carried out for β-quartz. This capability corresponds to a method of structure prediction. Support for the applicability of the approach to GeO(2) is provided by analysing the structural refinements of Haines et al. [J. Solid State Chem. (2002) ▸, 166, 434–441]. An analysis of trends in tetrahedral distortion and tilt angle in α-quartz and GeO(2) supports the view that GeO(2) is a good model for quartz at high pressure. International Union of Crystallography 2021-05-20 /pmc/articles/PMC8182799/ /pubmed/34096525 http://dx.doi.org/10.1107/S2052520621002717 Text en © Fricke and Thomas 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Fricke, Maximilian Thomas, Noel W. Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title | Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title_full | Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title_fullStr | Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title_full_unstemmed | Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title_short | Modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
title_sort | modelling the structural variation of quartz and germanium dioxide with temperature by means of transformed crystallographic data |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182799/ https://www.ncbi.nlm.nih.gov/pubmed/34096525 http://dx.doi.org/10.1107/S2052520621002717 |
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