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A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection

Tuberculosis (TB) is known as a potentially dangerous and infectious disease that affects mostly lungs worldwide. The detection and treatment of TB at an early stage are critical for preventing the disease and decreasing the risk of mortality and transmission of it to others. Nowadays, as the most c...

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Autores principales: Tasci, Erdal, Uluturk, Caner, Ugur, Aybars
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182991/
https://www.ncbi.nlm.nih.gov/pubmed/34121816
http://dx.doi.org/10.1007/s00521-021-06177-2
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author Tasci, Erdal
Uluturk, Caner
Ugur, Aybars
author_facet Tasci, Erdal
Uluturk, Caner
Ugur, Aybars
author_sort Tasci, Erdal
collection PubMed
description Tuberculosis (TB) is known as a potentially dangerous and infectious disease that affects mostly lungs worldwide. The detection and treatment of TB at an early stage are critical for preventing the disease and decreasing the risk of mortality and transmission of it to others. Nowadays, as the most common medical imaging technique, chest radiography (CXR) is useful for determining thoracic diseases. Computer-aided detection (CADe) systems are also crucial mechanisms to provide more reliable, efficient, and systematic approaches with accelerating the decision-making process of clinicians. In this study, we propose voting and preprocessing variations-based ensemble CNN model for TB detection. We utilize 40 different variations in fine-tuned CNN models based on InceptionV3 and Xception by also using CLAHE (contrast-limited adaptive histogram equalization) preprocessing technique and 10 different image transformations for data augmentation types. After analyzing all these combination schemes, three or five best classifier models are selected as base learners for voting operations. We apply the Bayesian optimization-based weighted voting and the average of probabilities as a combination rule in soft voting methods on two TB CXR image datasets to get better results in various numbers of models. The computational results indicate that the proposed method achieves 97.500% and 97.699% accuracy rates on Montgomery and Shenzhen datasets, respectively. Furthermore, our method outperforms state-of-the-art results for the two TB detection datasets in terms of accuracy rate.
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spelling pubmed-81829912021-06-07 A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection Tasci, Erdal Uluturk, Caner Ugur, Aybars Neural Comput Appl Original Article Tuberculosis (TB) is known as a potentially dangerous and infectious disease that affects mostly lungs worldwide. The detection and treatment of TB at an early stage are critical for preventing the disease and decreasing the risk of mortality and transmission of it to others. Nowadays, as the most common medical imaging technique, chest radiography (CXR) is useful for determining thoracic diseases. Computer-aided detection (CADe) systems are also crucial mechanisms to provide more reliable, efficient, and systematic approaches with accelerating the decision-making process of clinicians. In this study, we propose voting and preprocessing variations-based ensemble CNN model for TB detection. We utilize 40 different variations in fine-tuned CNN models based on InceptionV3 and Xception by also using CLAHE (contrast-limited adaptive histogram equalization) preprocessing technique and 10 different image transformations for data augmentation types. After analyzing all these combination schemes, three or five best classifier models are selected as base learners for voting operations. We apply the Bayesian optimization-based weighted voting and the average of probabilities as a combination rule in soft voting methods on two TB CXR image datasets to get better results in various numbers of models. The computational results indicate that the proposed method achieves 97.500% and 97.699% accuracy rates on Montgomery and Shenzhen datasets, respectively. Furthermore, our method outperforms state-of-the-art results for the two TB detection datasets in terms of accuracy rate. Springer London 2021-06-07 2021 /pmc/articles/PMC8182991/ /pubmed/34121816 http://dx.doi.org/10.1007/s00521-021-06177-2 Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Tasci, Erdal
Uluturk, Caner
Ugur, Aybars
A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title_full A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title_fullStr A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title_full_unstemmed A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title_short A voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
title_sort voting-based ensemble deep learning method focusing on image augmentation and preprocessing variations for tuberculosis detection
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8182991/
https://www.ncbi.nlm.nih.gov/pubmed/34121816
http://dx.doi.org/10.1007/s00521-021-06177-2
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