Cargando…
Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate
A simplified two-step synthesis of 3,6-dihydroxypicolinic acid (3-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxylic acid), C(6)H(5)NO(4) (II), an intermediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile intermediate, dipotassium 3...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183438/ https://www.ncbi.nlm.nih.gov/pubmed/34164140 http://dx.doi.org/10.1107/S2056989021004904 |
_version_ | 1783704374887841792 |
---|---|
author | Behrman, Edward J. Parkin, Sean |
author_facet | Behrman, Edward J. Parkin, Sean |
author_sort | Behrman, Edward J. |
collection | PubMed |
description | A simplified two-step synthesis of 3,6-dihydroxypicolinic acid (3-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxylic acid), C(6)H(5)NO(4) (II), an intermediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile intermediate, dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate, 2K(+)·C(6)H(3)NO(7)S(2−)·H(2)O (I), is also described. Compound I comprises a pyridine ring with carboxylate, hydroxyl (connected by an intramolecular O—H⋯O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water molecule of crystallization. These components are connected into a three-dimensional network by O—H⋯O hydrogen bonds arising from the water molecule, C—H⋯O interactions and π–π stacking of pyridine rings. In II, the ring nitrogen atom is protonated, with charge balance provided by the carboxylate group (i.e., a zwitterion). The intramolecular O—H⋯O hydrogen bond observed in I is preserved in II. Crystals of II have unusual space-group symmetry of type Abm2 in which extended planar networks of O—H⋯O and N—H⋯O hydrogen-bonded molecules form sheets lying parallel to the ac plane, constrained to b = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to c. |
format | Online Article Text |
id | pubmed-8183438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-81834382021-06-22 Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate Behrman, Edward J. Parkin, Sean Acta Crystallogr E Crystallogr Commun Research Communications A simplified two-step synthesis of 3,6-dihydroxypicolinic acid (3-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxylic acid), C(6)H(5)NO(4) (II), an intermediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile intermediate, dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate, 2K(+)·C(6)H(3)NO(7)S(2−)·H(2)O (I), is also described. Compound I comprises a pyridine ring with carboxylate, hydroxyl (connected by an intramolecular O—H⋯O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water molecule of crystallization. These components are connected into a three-dimensional network by O—H⋯O hydrogen bonds arising from the water molecule, C—H⋯O interactions and π–π stacking of pyridine rings. In II, the ring nitrogen atom is protonated, with charge balance provided by the carboxylate group (i.e., a zwitterion). The intramolecular O—H⋯O hydrogen bond observed in I is preserved in II. Crystals of II have unusual space-group symmetry of type Abm2 in which extended planar networks of O—H⋯O and N—H⋯O hydrogen-bonded molecules form sheets lying parallel to the ac plane, constrained to b = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to c. International Union of Crystallography 2021-05-14 /pmc/articles/PMC8183438/ /pubmed/34164140 http://dx.doi.org/10.1107/S2056989021004904 Text en © Behrman and Parkin 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Behrman, Edward J. Parkin, Sean Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title | Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title_full | Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title_fullStr | Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title_full_unstemmed | Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title_short | Synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
title_sort | synthesis and crystal structures of 3,6-dihydroxypicolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183438/ https://www.ncbi.nlm.nih.gov/pubmed/34164140 http://dx.doi.org/10.1107/S2056989021004904 |
work_keys_str_mv | AT behrmanedwardj synthesisandcrystalstructuresof36dihydroxypicolinicacidanditslabileintermediatedipotassium3hydroxy6sulfonatooxypyridine2carboxylatemonohydrate AT parkinsean synthesisandcrystalstructuresof36dihydroxypicolinicacidanditslabileintermediatedipotassium3hydroxy6sulfonatooxypyridine2carboxylatemonohydrate |