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Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate

A simplified two-step synthesis of 3,6-di­hydroxy­picolinic acid (3-hy­droxy-6-oxo-1,6-di­hydro­pyridine-2-carb­oxy­lic acid), C(6)H(5)NO(4) (II), an inter­mediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile inter­mediate, dipotassium 3...

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Autores principales: Behrman, Edward J., Parkin, Sean
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183438/
https://www.ncbi.nlm.nih.gov/pubmed/34164140
http://dx.doi.org/10.1107/S2056989021004904
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author Behrman, Edward J.
Parkin, Sean
author_facet Behrman, Edward J.
Parkin, Sean
author_sort Behrman, Edward J.
collection PubMed
description A simplified two-step synthesis of 3,6-di­hydroxy­picolinic acid (3-hy­droxy-6-oxo-1,6-di­hydro­pyridine-2-carb­oxy­lic acid), C(6)H(5)NO(4) (II), an inter­mediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile inter­mediate, dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate, 2K(+)·C(6)H(3)NO(7)S(2−)·H(2)O (I), is also described. Compound I comprises a pyridine ring with carboxyl­ate, hydroxyl (connected by an intra­molecular O—H⋯O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water mol­ecule of crystallization. These components are connected into a three-dimensional network by O—H⋯O hydrogen bonds arising from the water mol­ecule, C—H⋯O inter­actions and π–π stacking of pyridine rings. In II, the ring nitro­gen atom is protonated, with charge balance provided by the carboxyl­ate group (i.e., a zwitterion). The intra­molecular O—H⋯O hydrogen bond observed in I is preserved in II. Crystals of II have unusual space-group symmetry of type Abm2 in which extended planar networks of O—H⋯O and N—H⋯O hydrogen-bonded mol­ecules form sheets lying parallel to the ac plane, constrained to b = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to c.
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spelling pubmed-81834382021-06-22 Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate Behrman, Edward J. Parkin, Sean Acta Crystallogr E Crystallogr Commun Research Communications A simplified two-step synthesis of 3,6-di­hydroxy­picolinic acid (3-hy­droxy-6-oxo-1,6-di­hydro­pyridine-2-carb­oxy­lic acid), C(6)H(5)NO(4) (II), an inter­mediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile inter­mediate, dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate, 2K(+)·C(6)H(3)NO(7)S(2−)·H(2)O (I), is also described. Compound I comprises a pyridine ring with carboxyl­ate, hydroxyl (connected by an intra­molecular O—H⋯O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water mol­ecule of crystallization. These components are connected into a three-dimensional network by O—H⋯O hydrogen bonds arising from the water mol­ecule, C—H⋯O inter­actions and π–π stacking of pyridine rings. In II, the ring nitro­gen atom is protonated, with charge balance provided by the carboxyl­ate group (i.e., a zwitterion). The intra­molecular O—H⋯O hydrogen bond observed in I is preserved in II. Crystals of II have unusual space-group symmetry of type Abm2 in which extended planar networks of O—H⋯O and N—H⋯O hydrogen-bonded mol­ecules form sheets lying parallel to the ac plane, constrained to b = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to c. International Union of Crystallography 2021-05-14 /pmc/articles/PMC8183438/ /pubmed/34164140 http://dx.doi.org/10.1107/S2056989021004904 Text en © Behrman and Parkin 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Behrman, Edward J.
Parkin, Sean
Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title_full Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title_fullStr Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title_full_unstemmed Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title_short Synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
title_sort synthesis and crystal structures of 3,6-di­hydroxy­picolinic acid and its labile inter­mediate dipotassium 3-hy­droxy-6-(sulfonato­oxy)pyridine-2-carboxyl­ate monohydrate
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183438/
https://www.ncbi.nlm.nih.gov/pubmed/34164140
http://dx.doi.org/10.1107/S2056989021004904
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