The complete chloroplast genome of Agave sisalana

Agave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with...

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Autores principales: Yang, Xinli, Huang, Xing, Tan, Shibei, Chen, Tao, Qin, Xu, Chen, Helong, Xi, Jingen, Yi, Kexian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183535/
https://www.ncbi.nlm.nih.gov/pubmed/34124368
http://dx.doi.org/10.1080/23802359.2021.1935345
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author Yang, Xinli
Huang, Xing
Tan, Shibei
Chen, Tao
Qin, Xu
Chen, Helong
Xi, Jingen
Yi, Kexian
author_facet Yang, Xinli
Huang, Xing
Tan, Shibei
Chen, Tao
Qin, Xu
Chen, Helong
Xi, Jingen
Yi, Kexian
author_sort Yang, Xinli
collection PubMed
description Agave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with a large single copy region (LSC, 85,894 bp), a pair of inverted repeat regions (IR, 26,573 bp) and a small single copy region (SSC, 18,228 bp). Besides, 86 protein-coding genes, 38 tRNAs and 8 rRNAs are annotated on the chloroplast genome. Phylogenetic result reveals that A. sisalana is closely related with A. americana and A. H11648.
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spelling pubmed-81835352021-06-11 The complete chloroplast genome of Agave sisalana Yang, Xinli Huang, Xing Tan, Shibei Chen, Tao Qin, Xu Chen, Helong Xi, Jingen Yi, Kexian Mitochondrial DNA B Resour Mitogenome Announcement Agave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with a large single copy region (LSC, 85,894 bp), a pair of inverted repeat regions (IR, 26,573 bp) and a small single copy region (SSC, 18,228 bp). Besides, 86 protein-coding genes, 38 tRNAs and 8 rRNAs are annotated on the chloroplast genome. Phylogenetic result reveals that A. sisalana is closely related with A. americana and A. H11648. Taylor & Francis 2021-06-04 /pmc/articles/PMC8183535/ /pubmed/34124368 http://dx.doi.org/10.1080/23802359.2021.1935345 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Xinli
Huang, Xing
Tan, Shibei
Chen, Tao
Qin, Xu
Chen, Helong
Xi, Jingen
Yi, Kexian
The complete chloroplast genome of Agave sisalana
title The complete chloroplast genome of Agave sisalana
title_full The complete chloroplast genome of Agave sisalana
title_fullStr The complete chloroplast genome of Agave sisalana
title_full_unstemmed The complete chloroplast genome of Agave sisalana
title_short The complete chloroplast genome of Agave sisalana
title_sort complete chloroplast genome of agave sisalana
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183535/
https://www.ncbi.nlm.nih.gov/pubmed/34124368
http://dx.doi.org/10.1080/23802359.2021.1935345
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