The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)

The complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy...

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Autores principales: Wei-Cai, Song, Xiao-Fan, Liu, Wang, Shuo, Rui-Qing, Zhang, Chao, Shi, Zhang, Yun-Jiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183548/
https://www.ncbi.nlm.nih.gov/pubmed/34124360
http://dx.doi.org/10.1080/23802359.2021.1934165
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author Wei-Cai, Song
Xiao-Fan, Liu
Wang, Shuo
Rui-Qing, Zhang
Chao, Shi
Zhang, Yun-Jiao
author_facet Wei-Cai, Song
Xiao-Fan, Liu
Wang, Shuo
Rui-Qing, Zhang
Chao, Shi
Zhang, Yun-Jiao
author_sort Wei-Cai, Song
collection PubMed
description The complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy (SSC, 18,293 bp), separated by a pair of inverted repeats (IRa, IRb) of 24,864 bp. The G + C content of this cp genome was 37.21%. Gene annotation analysis identified 130 genes including 85 protein-coding genes, 37 transfer RNA, and 8 ribosomal RNA genes. The maximum-likelihood phylogenetic analysis result showed that C. crepidioides was closely related to Nannoglottis ravida in the phylogenetic relationship.
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spelling pubmed-81835482021-06-11 The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) Wei-Cai, Song Xiao-Fan, Liu Wang, Shuo Rui-Qing, Zhang Chao, Shi Zhang, Yun-Jiao Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy (SSC, 18,293 bp), separated by a pair of inverted repeats (IRa, IRb) of 24,864 bp. The G + C content of this cp genome was 37.21%. Gene annotation analysis identified 130 genes including 85 protein-coding genes, 37 transfer RNA, and 8 ribosomal RNA genes. The maximum-likelihood phylogenetic analysis result showed that C. crepidioides was closely related to Nannoglottis ravida in the phylogenetic relationship. Taylor & Francis 2021-06-03 /pmc/articles/PMC8183548/ /pubmed/34124360 http://dx.doi.org/10.1080/23802359.2021.1934165 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wei-Cai, Song
Xiao-Fan, Liu
Wang, Shuo
Rui-Qing, Zhang
Chao, Shi
Zhang, Yun-Jiao
The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title_full The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title_fullStr The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title_full_unstemmed The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title_short The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
title_sort complete chloroplast genome sequence of crassocephalum crepidioides (benth.) s. moore. (asteraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8183548/
https://www.ncbi.nlm.nih.gov/pubmed/34124360
http://dx.doi.org/10.1080/23802359.2021.1934165
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