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Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography

OBJECTIVES: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT)...

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Autores principales: Wang, Chengdi, Shao, Jun, Lv, Junwei, Cao, Yidi, Zhu, Chaonan, Li, Jingwei, Shen, Wei, Shi, Lei, Liu, Dan, Li, Weimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Neoplasia Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8184655/
https://www.ncbi.nlm.nih.gov/pubmed/34087705
http://dx.doi.org/10.1016/j.tranon.2021.101141
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author Wang, Chengdi
Shao, Jun
Lv, Junwei
Cao, Yidi
Zhu, Chaonan
Li, Jingwei
Shen, Wei
Shi, Lei
Liu, Dan
Li, Weimin
author_facet Wang, Chengdi
Shao, Jun
Lv, Junwei
Cao, Yidi
Zhu, Chaonan
Li, Jingwei
Shen, Wei
Shi, Lei
Liu, Dan
Li, Weimin
author_sort Wang, Chengdi
collection PubMed
description OBJECTIVES: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT) images. METHODS: A dataset of 1222 patients with lung adenocarcinoma were retrospectively enrolled from three medical institutions. The anonymised preoperative CT images and pathological labels of atypical adenomatous hyperplasia, adenocarcinoma in situ, minimally invasive adenocarcinoma, invasive adenocarcinoma (IAC) with five predominant components were obtained. These pathological labels were divided into 2-category classification (IAC; non-IAC), 3-category and 8-category. We modeled the classification task of histological subtypes based on modified ResNet-34 deep learning network, radiomics strategies and deep radiomics combined algorithm. Then we established the prognostic models in lung adenocarcinoma patients with survival outcomes. The accuracy (ACC), area under ROC curves (AUCs) and C-index were primarily performed to evaluate the algorithms. RESULTS: This study included a training set (n = 802) and two validation cohorts (internal, n = 196; external, n = 224). The ACC of deep radiomics algorithm in internal validation achieved 0.8776, 0.8061 in the 2-category, 3-category classification, respectively. Even in 8 classifications, the AUC ranged from 0.739 to 0.940 in internal set. Further, we constructed a prognosis model that C-index was 0.892(95% CI: 0.846–0.937) in internal validation set. CONCLUSIONS: The automated deep radiomics based triage system has achieved the great performance in the subtype classification and survival predictability in patients with CT-detected lung adenocarcinoma nodules, providing the clinical guide for treatment strategies.
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spelling pubmed-81846552021-06-16 Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography Wang, Chengdi Shao, Jun Lv, Junwei Cao, Yidi Zhu, Chaonan Li, Jingwei Shen, Wei Shi, Lei Liu, Dan Li, Weimin Transl Oncol Original Research OBJECTIVES: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT) images. METHODS: A dataset of 1222 patients with lung adenocarcinoma were retrospectively enrolled from three medical institutions. The anonymised preoperative CT images and pathological labels of atypical adenomatous hyperplasia, adenocarcinoma in situ, minimally invasive adenocarcinoma, invasive adenocarcinoma (IAC) with five predominant components were obtained. These pathological labels were divided into 2-category classification (IAC; non-IAC), 3-category and 8-category. We modeled the classification task of histological subtypes based on modified ResNet-34 deep learning network, radiomics strategies and deep radiomics combined algorithm. Then we established the prognostic models in lung adenocarcinoma patients with survival outcomes. The accuracy (ACC), area under ROC curves (AUCs) and C-index were primarily performed to evaluate the algorithms. RESULTS: This study included a training set (n = 802) and two validation cohorts (internal, n = 196; external, n = 224). The ACC of deep radiomics algorithm in internal validation achieved 0.8776, 0.8061 in the 2-category, 3-category classification, respectively. Even in 8 classifications, the AUC ranged from 0.739 to 0.940 in internal set. Further, we constructed a prognosis model that C-index was 0.892(95% CI: 0.846–0.937) in internal validation set. CONCLUSIONS: The automated deep radiomics based triage system has achieved the great performance in the subtype classification and survival predictability in patients with CT-detected lung adenocarcinoma nodules, providing the clinical guide for treatment strategies. Neoplasia Press 2021-06-01 /pmc/articles/PMC8184655/ /pubmed/34087705 http://dx.doi.org/10.1016/j.tranon.2021.101141 Text en © 2021 Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research
Wang, Chengdi
Shao, Jun
Lv, Junwei
Cao, Yidi
Zhu, Chaonan
Li, Jingwei
Shen, Wei
Shi, Lei
Liu, Dan
Li, Weimin
Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_full Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_fullStr Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_full_unstemmed Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_short Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_sort deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8184655/
https://www.ncbi.nlm.nih.gov/pubmed/34087705
http://dx.doi.org/10.1016/j.tranon.2021.101141
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