Cargando…
Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and e...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185313/ https://www.ncbi.nlm.nih.gov/pubmed/34103090 http://dx.doi.org/10.1186/s40001-021-00524-8 |
_version_ | 1783704764384542720 |
---|---|
author | SeyedAlinaghi, SeyedAhmad Mirzapour, Pegah Dadras, Omid Pashaei, Zahra Karimi, Amirali MohsseniPour, Mehrzad Soleymanzadeh, Mahdi Barzegary, Alireza Afsahi, Amir Masoud Vahedi, Farzin Shamsabadi, Ahmadreza Behnezhad, Farzane Saeidi, Solmaz Mehraeen, Esmaeil Shayesteh Jahanfar |
author_facet | SeyedAlinaghi, SeyedAhmad Mirzapour, Pegah Dadras, Omid Pashaei, Zahra Karimi, Amirali MohsseniPour, Mehrzad Soleymanzadeh, Mahdi Barzegary, Alireza Afsahi, Amir Masoud Vahedi, Farzin Shamsabadi, Ahmadreza Behnezhad, Farzane Saeidi, Solmaz Mehraeen, Esmaeil Shayesteh Jahanfar |
author_sort | SeyedAlinaghi, SeyedAhmad |
collection | PubMed |
description | INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and explore the related morbidity and mortality. METHODS: A systematic review including the current evidence related to different variants of SARS-CoV-2 and the related morbidity and mortality was conducted through a systematic search utilizing the keywords in the online databases including Scopus, PubMed, Web of Science, and Science Direct; we retrieved all related papers and reports published in English from December 2019 to September 2020. RESULTS: A review of identified articles has shown three main genomic variants, including type A, type B, and type C. we also identified three clades including S, V, and G. Studies have demonstrated that the C14408T and A23403G alterations in the Nsp12 and S proteins are the most prominent alterations in the world, leading to life-threatening mutations.The spike D614G amino acid change has become the most common variant since December 2019. From missense mutations found from Gujarat SARS-CoV-2 genomes, C28854T, deleterious mutation in the nucleocapsid (N) gene was significantly associated with patients' mortality. The other significant deleterious variant (G25563T) is found in patients located in Orf3a and has a potential role in viral pathogenesis. CONCLUSION: Overall, researchers identified several SARS-CoV-2 variants changing clinical manifestations and increasing the transmissibility, morbidity, and mortality of COVID-19. This should be considered in current practice and interventions to combat the pandemic and prevent related morbidity and mortality. |
format | Online Article Text |
id | pubmed-8185313 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-81853132021-06-08 Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review SeyedAlinaghi, SeyedAhmad Mirzapour, Pegah Dadras, Omid Pashaei, Zahra Karimi, Amirali MohsseniPour, Mehrzad Soleymanzadeh, Mahdi Barzegary, Alireza Afsahi, Amir Masoud Vahedi, Farzin Shamsabadi, Ahmadreza Behnezhad, Farzane Saeidi, Solmaz Mehraeen, Esmaeil Shayesteh Jahanfar Eur J Med Res Review INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and explore the related morbidity and mortality. METHODS: A systematic review including the current evidence related to different variants of SARS-CoV-2 and the related morbidity and mortality was conducted through a systematic search utilizing the keywords in the online databases including Scopus, PubMed, Web of Science, and Science Direct; we retrieved all related papers and reports published in English from December 2019 to September 2020. RESULTS: A review of identified articles has shown three main genomic variants, including type A, type B, and type C. we also identified three clades including S, V, and G. Studies have demonstrated that the C14408T and A23403G alterations in the Nsp12 and S proteins are the most prominent alterations in the world, leading to life-threatening mutations.The spike D614G amino acid change has become the most common variant since December 2019. From missense mutations found from Gujarat SARS-CoV-2 genomes, C28854T, deleterious mutation in the nucleocapsid (N) gene was significantly associated with patients' mortality. The other significant deleterious variant (G25563T) is found in patients located in Orf3a and has a potential role in viral pathogenesis. CONCLUSION: Overall, researchers identified several SARS-CoV-2 variants changing clinical manifestations and increasing the transmissibility, morbidity, and mortality of COVID-19. This should be considered in current practice and interventions to combat the pandemic and prevent related morbidity and mortality. BioMed Central 2021-06-08 /pmc/articles/PMC8185313/ /pubmed/34103090 http://dx.doi.org/10.1186/s40001-021-00524-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Review SeyedAlinaghi, SeyedAhmad Mirzapour, Pegah Dadras, Omid Pashaei, Zahra Karimi, Amirali MohsseniPour, Mehrzad Soleymanzadeh, Mahdi Barzegary, Alireza Afsahi, Amir Masoud Vahedi, Farzin Shamsabadi, Ahmadreza Behnezhad, Farzane Saeidi, Solmaz Mehraeen, Esmaeil Shayesteh Jahanfar Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title | Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title_full | Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title_fullStr | Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title_full_unstemmed | Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title_short | Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review |
title_sort | characterization of sars-cov-2 different variants and related morbidity and mortality: a systematic review |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185313/ https://www.ncbi.nlm.nih.gov/pubmed/34103090 http://dx.doi.org/10.1186/s40001-021-00524-8 |
work_keys_str_mv | AT seyedalinaghiseyedahmad characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT mirzapourpegah characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT dadrasomid characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT pashaeizahra characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT karimiamirali characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT mohssenipourmehrzad characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT soleymanzadehmahdi characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT barzegaryalireza characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT afsahiamirmasoud characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT vahedifarzin characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT shamsabadiahmadreza characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT behnezhadfarzane characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT saeidisolmaz characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT mehraeenesmaeil characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview AT shayestehjahanfar characterizationofsarscov2differentvariantsandrelatedmorbidityandmortalityasystematicreview |