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Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review

INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and e...

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Autores principales: SeyedAlinaghi, SeyedAhmad, Mirzapour, Pegah, Dadras, Omid, Pashaei, Zahra, Karimi, Amirali, MohsseniPour, Mehrzad, Soleymanzadeh, Mahdi, Barzegary, Alireza, Afsahi, Amir Masoud, Vahedi, Farzin, Shamsabadi, Ahmadreza, Behnezhad, Farzane, Saeidi, Solmaz, Mehraeen, Esmaeil, Shayesteh Jahanfar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185313/
https://www.ncbi.nlm.nih.gov/pubmed/34103090
http://dx.doi.org/10.1186/s40001-021-00524-8
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author SeyedAlinaghi, SeyedAhmad
Mirzapour, Pegah
Dadras, Omid
Pashaei, Zahra
Karimi, Amirali
MohsseniPour, Mehrzad
Soleymanzadeh, Mahdi
Barzegary, Alireza
Afsahi, Amir Masoud
Vahedi, Farzin
Shamsabadi, Ahmadreza
Behnezhad, Farzane
Saeidi, Solmaz
Mehraeen, Esmaeil
Shayesteh Jahanfar
author_facet SeyedAlinaghi, SeyedAhmad
Mirzapour, Pegah
Dadras, Omid
Pashaei, Zahra
Karimi, Amirali
MohsseniPour, Mehrzad
Soleymanzadeh, Mahdi
Barzegary, Alireza
Afsahi, Amir Masoud
Vahedi, Farzin
Shamsabadi, Ahmadreza
Behnezhad, Farzane
Saeidi, Solmaz
Mehraeen, Esmaeil
Shayesteh Jahanfar
author_sort SeyedAlinaghi, SeyedAhmad
collection PubMed
description INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and explore the related morbidity and mortality. METHODS: A systematic review including the current evidence related to different variants of SARS-CoV-2 and the related morbidity and mortality was conducted through a systematic search utilizing the keywords in the online databases including Scopus, PubMed, Web of Science, and Science Direct; we retrieved all related papers and reports published in English from December 2019 to September 2020. RESULTS: A review of identified articles has shown three main genomic variants, including type A, type B, and type C. we also identified three clades including S, V, and G. Studies have demonstrated that the C14408T and A23403G alterations in the Nsp12 and S proteins are the most prominent alterations in the world, leading to life-threatening mutations.The spike D614G amino acid change has become the most common variant since December 2019. From missense mutations found from Gujarat SARS-CoV-2 genomes, C28854T, deleterious mutation in the nucleocapsid (N) gene was significantly associated with patients' mortality. The other significant deleterious variant (G25563T) is found in patients located in Orf3a and has a potential role in viral pathogenesis. CONCLUSION: Overall, researchers identified several SARS-CoV-2 variants changing clinical manifestations and increasing the transmissibility, morbidity, and mortality of COVID-19. This should be considered in current practice and interventions to combat the pandemic and prevent related morbidity and mortality.
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spelling pubmed-81853132021-06-08 Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review SeyedAlinaghi, SeyedAhmad Mirzapour, Pegah Dadras, Omid Pashaei, Zahra Karimi, Amirali MohsseniPour, Mehrzad Soleymanzadeh, Mahdi Barzegary, Alireza Afsahi, Amir Masoud Vahedi, Farzin Shamsabadi, Ahmadreza Behnezhad, Farzane Saeidi, Solmaz Mehraeen, Esmaeil Shayesteh Jahanfar Eur J Med Res Review INTRODUCTION: Coronavirus Disease-2019 (SARS-CoV-2) started its devastating trajectory into a global pandemic in Wuhan, China, in December 2019. Ever since, several variants of SARS-CoV-2 have been identified. In the present review, we aimed to characterize the different variants of SARS-CoV-2 and explore the related morbidity and mortality. METHODS: A systematic review including the current evidence related to different variants of SARS-CoV-2 and the related morbidity and mortality was conducted through a systematic search utilizing the keywords in the online databases including Scopus, PubMed, Web of Science, and Science Direct; we retrieved all related papers and reports published in English from December 2019 to September 2020. RESULTS: A review of identified articles has shown three main genomic variants, including type A, type B, and type C. we also identified three clades including S, V, and G. Studies have demonstrated that the C14408T and A23403G alterations in the Nsp12 and S proteins are the most prominent alterations in the world, leading to life-threatening mutations.The spike D614G amino acid change has become the most common variant since December 2019. From missense mutations found from Gujarat SARS-CoV-2 genomes, C28854T, deleterious mutation in the nucleocapsid (N) gene was significantly associated with patients' mortality. The other significant deleterious variant (G25563T) is found in patients located in Orf3a and has a potential role in viral pathogenesis. CONCLUSION: Overall, researchers identified several SARS-CoV-2 variants changing clinical manifestations and increasing the transmissibility, morbidity, and mortality of COVID-19. This should be considered in current practice and interventions to combat the pandemic and prevent related morbidity and mortality. BioMed Central 2021-06-08 /pmc/articles/PMC8185313/ /pubmed/34103090 http://dx.doi.org/10.1186/s40001-021-00524-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
SeyedAlinaghi, SeyedAhmad
Mirzapour, Pegah
Dadras, Omid
Pashaei, Zahra
Karimi, Amirali
MohsseniPour, Mehrzad
Soleymanzadeh, Mahdi
Barzegary, Alireza
Afsahi, Amir Masoud
Vahedi, Farzin
Shamsabadi, Ahmadreza
Behnezhad, Farzane
Saeidi, Solmaz
Mehraeen, Esmaeil
Shayesteh Jahanfar
Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title_full Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title_fullStr Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title_full_unstemmed Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title_short Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review
title_sort characterization of sars-cov-2 different variants and related morbidity and mortality: a systematic review
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185313/
https://www.ncbi.nlm.nih.gov/pubmed/34103090
http://dx.doi.org/10.1186/s40001-021-00524-8
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