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A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors
BACKGROUND: Understanding common and unique mechanisms driving oncogenic processes in human tumors is indispensable to develop efficient therapies. Recent studies have proposed Twinfilin Actin Binding Protein 1 (TWF1) as a putative driver gene in lung cancer, pancreatic cancer and breast cancer, how...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185641/ https://www.ncbi.nlm.nih.gov/pubmed/34113576 http://dx.doi.org/10.3389/fonc.2021.692136 |
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author | Huo, Gengwei Wang, Yali Chen, Jinliang Song, Ying Zhang, Cuicui Guo, Hua Zuo, Ran Zhu, Fuyi Cui, Jinfang Chen, Weidong Chen, Wenming Chen, Peng |
author_facet | Huo, Gengwei Wang, Yali Chen, Jinliang Song, Ying Zhang, Cuicui Guo, Hua Zuo, Ran Zhu, Fuyi Cui, Jinfang Chen, Weidong Chen, Wenming Chen, Peng |
author_sort | Huo, Gengwei |
collection | PubMed |
description | BACKGROUND: Understanding common and unique mechanisms driving oncogenic processes in human tumors is indispensable to develop efficient therapies. Recent studies have proposed Twinfilin Actin Binding Protein 1 (TWF1) as a putative driver gene in lung cancer, pancreatic cancer and breast cancer, however a systematic pan-cancer analysis has not been carried out. METHODS: Here, we set out to explore the role of TWF1 in 33 tumor types using TCGA (The Cancer Genome Atlas), GEO (Gene Expression Omnibus) dataset, Human Protein Atlas (HPA), and several bioinformatic tools. RESULTS: As part of our analysis, we have assessed TWF1 expression across tumors. We found that over-expression of TWF1 generally predicted poor OS for patients with tumors with high TWF1 expression, such as mesothelioma, lung adenocarcinoma, cervical cancer and pancreatic adenocarcinoma. We also assessed the mutation burden of TWF1 in cancer and the TWF1-associated survival of cancer patients, compared the phosphorylation of TWF1 between normal and primary tumor tissues and explored putative functional mechanisms in TWF1-mediated oncogenesis. CONCLUSIONS: Our pan-cancer analysis provides a comprehensive overview of the oncogenic roles of TWF1 in multiple human cancers. |
format | Online Article Text |
id | pubmed-8185641 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81856412021-06-09 A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors Huo, Gengwei Wang, Yali Chen, Jinliang Song, Ying Zhang, Cuicui Guo, Hua Zuo, Ran Zhu, Fuyi Cui, Jinfang Chen, Weidong Chen, Wenming Chen, Peng Front Oncol Oncology BACKGROUND: Understanding common and unique mechanisms driving oncogenic processes in human tumors is indispensable to develop efficient therapies. Recent studies have proposed Twinfilin Actin Binding Protein 1 (TWF1) as a putative driver gene in lung cancer, pancreatic cancer and breast cancer, however a systematic pan-cancer analysis has not been carried out. METHODS: Here, we set out to explore the role of TWF1 in 33 tumor types using TCGA (The Cancer Genome Atlas), GEO (Gene Expression Omnibus) dataset, Human Protein Atlas (HPA), and several bioinformatic tools. RESULTS: As part of our analysis, we have assessed TWF1 expression across tumors. We found that over-expression of TWF1 generally predicted poor OS for patients with tumors with high TWF1 expression, such as mesothelioma, lung adenocarcinoma, cervical cancer and pancreatic adenocarcinoma. We also assessed the mutation burden of TWF1 in cancer and the TWF1-associated survival of cancer patients, compared the phosphorylation of TWF1 between normal and primary tumor tissues and explored putative functional mechanisms in TWF1-mediated oncogenesis. CONCLUSIONS: Our pan-cancer analysis provides a comprehensive overview of the oncogenic roles of TWF1 in multiple human cancers. Frontiers Media S.A. 2021-05-25 /pmc/articles/PMC8185641/ /pubmed/34113576 http://dx.doi.org/10.3389/fonc.2021.692136 Text en Copyright © 2021 Huo, Wang, Chen, Song, Zhang, Guo, Zuo, Zhu, Cui, Chen, Chen and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Huo, Gengwei Wang, Yali Chen, Jinliang Song, Ying Zhang, Cuicui Guo, Hua Zuo, Ran Zhu, Fuyi Cui, Jinfang Chen, Weidong Chen, Wenming Chen, Peng A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title | A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title_full | A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title_fullStr | A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title_full_unstemmed | A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title_short | A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors |
title_sort | pan-cancer analysis of the oncogenic role of twinfilin actin binding protein 1 in human tumors |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8185641/ https://www.ncbi.nlm.nih.gov/pubmed/34113576 http://dx.doi.org/10.3389/fonc.2021.692136 |
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