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Realistic boundary conditions in SimVascular through inlet catheter modeling

OBJECTIVE: This study aims at developing a pipeline that provides the capability to include the catheter effect in the computational fluid dynamics (CFD) simulations of the cardiovascular system and other human vascular flows carried out with the open-source software SimVascular. This tool is partic...

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Autores principales: Taebi, Amirtahà, Berk, Selin, Roncali, Emilie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8186195/
https://www.ncbi.nlm.nih.gov/pubmed/34103097
http://dx.doi.org/10.1186/s13104-021-05631-7
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author Taebi, Amirtahà
Berk, Selin
Roncali, Emilie
author_facet Taebi, Amirtahà
Berk, Selin
Roncali, Emilie
author_sort Taebi, Amirtahà
collection PubMed
description OBJECTIVE: This study aims at developing a pipeline that provides the capability to include the catheter effect in the computational fluid dynamics (CFD) simulations of the cardiovascular system and other human vascular flows carried out with the open-source software SimVascular. This tool is particularly useful for CFD simulation of interventional radiology procedures such as tumor embolization where estimation of a therapeutic agent distribution is of interest. RESULTS: A pipeline is developed that generates boundary condition files which can be used in SimVascular CFD simulations. The boundary condition files are modified such that they simulate the effect of catheter presence on the flow field downstream of the inlet. Using this pipeline, the catheter flow, velocity profile, radius, wall thickness, and deviation from the vessel center can be defined. Since our method relies on the manipulation of the boundary condition that is imposed on the inlet, it is sensitive to the mesh density. The finer the mesh is (especially around the catheter wall), the more accurate the velocity estimations are. In this study, we also utilized this pipeline to qualitatively investigate the effect of catheter presence on the flow field in a truncated right hepatic arterial tree of a liver cancer patient. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-021-05631-7.
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spelling pubmed-81861952021-06-10 Realistic boundary conditions in SimVascular through inlet catheter modeling Taebi, Amirtahà Berk, Selin Roncali, Emilie BMC Res Notes Research Note OBJECTIVE: This study aims at developing a pipeline that provides the capability to include the catheter effect in the computational fluid dynamics (CFD) simulations of the cardiovascular system and other human vascular flows carried out with the open-source software SimVascular. This tool is particularly useful for CFD simulation of interventional radiology procedures such as tumor embolization where estimation of a therapeutic agent distribution is of interest. RESULTS: A pipeline is developed that generates boundary condition files which can be used in SimVascular CFD simulations. The boundary condition files are modified such that they simulate the effect of catheter presence on the flow field downstream of the inlet. Using this pipeline, the catheter flow, velocity profile, radius, wall thickness, and deviation from the vessel center can be defined. Since our method relies on the manipulation of the boundary condition that is imposed on the inlet, it is sensitive to the mesh density. The finer the mesh is (especially around the catheter wall), the more accurate the velocity estimations are. In this study, we also utilized this pipeline to qualitatively investigate the effect of catheter presence on the flow field in a truncated right hepatic arterial tree of a liver cancer patient. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-021-05631-7. BioMed Central 2021-05-31 /pmc/articles/PMC8186195/ /pubmed/34103097 http://dx.doi.org/10.1186/s13104-021-05631-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Note
Taebi, Amirtahà
Berk, Selin
Roncali, Emilie
Realistic boundary conditions in SimVascular through inlet catheter modeling
title Realistic boundary conditions in SimVascular through inlet catheter modeling
title_full Realistic boundary conditions in SimVascular through inlet catheter modeling
title_fullStr Realistic boundary conditions in SimVascular through inlet catheter modeling
title_full_unstemmed Realistic boundary conditions in SimVascular through inlet catheter modeling
title_short Realistic boundary conditions in SimVascular through inlet catheter modeling
title_sort realistic boundary conditions in simvascular through inlet catheter modeling
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8186195/
https://www.ncbi.nlm.nih.gov/pubmed/34103097
http://dx.doi.org/10.1186/s13104-021-05631-7
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