Cargando…

The critical importance of vouchers in genomics

A voucher is a permanently preserved specimen that is maintained in an accessible collection. In genomics, vouchers serve as the physical evidence for the taxonomic identification of genome assemblies. Unfortunately, the vast majority of vertebrate genomes stored in the GenBank database do not refer...

Descripción completa

Detalles Bibliográficos
Autores principales: Buckner, Janet C, Sanders, Robert C, Faircloth, Brant C, Chakrabarty, Prosanta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8186901/
https://www.ncbi.nlm.nih.gov/pubmed/34061026
http://dx.doi.org/10.7554/eLife.68264
_version_ 1783705036291833856
author Buckner, Janet C
Sanders, Robert C
Faircloth, Brant C
Chakrabarty, Prosanta
author_facet Buckner, Janet C
Sanders, Robert C
Faircloth, Brant C
Chakrabarty, Prosanta
author_sort Buckner, Janet C
collection PubMed
description A voucher is a permanently preserved specimen that is maintained in an accessible collection. In genomics, vouchers serve as the physical evidence for the taxonomic identification of genome assemblies. Unfortunately, the vast majority of vertebrate genomes stored in the GenBank database do not refer to voucher specimens. Here, we urge researchers generating new genome assemblies to deposit voucher specimens in accessible, permanent research collections, and to link these vouchers to publications, public databases, and repositories. We also encourage scientists to deposit voucher specimens in order to recognize the work of local field biologists and promote a diverse and inclusive knowledge base, and we recommend best practices for voucher deposition to prevent taxonomic errors and ensure reproducibility and legality in genetic studies.
format Online
Article
Text
id pubmed-8186901
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher eLife Sciences Publications, Ltd
record_format MEDLINE/PubMed
spelling pubmed-81869012021-06-09 The critical importance of vouchers in genomics Buckner, Janet C Sanders, Robert C Faircloth, Brant C Chakrabarty, Prosanta eLife Genetics and Genomics A voucher is a permanently preserved specimen that is maintained in an accessible collection. In genomics, vouchers serve as the physical evidence for the taxonomic identification of genome assemblies. Unfortunately, the vast majority of vertebrate genomes stored in the GenBank database do not refer to voucher specimens. Here, we urge researchers generating new genome assemblies to deposit voucher specimens in accessible, permanent research collections, and to link these vouchers to publications, public databases, and repositories. We also encourage scientists to deposit voucher specimens in order to recognize the work of local field biologists and promote a diverse and inclusive knowledge base, and we recommend best practices for voucher deposition to prevent taxonomic errors and ensure reproducibility and legality in genetic studies. eLife Sciences Publications, Ltd 2021-06-01 /pmc/articles/PMC8186901/ /pubmed/34061026 http://dx.doi.org/10.7554/eLife.68264 Text en © 2021, Buckner et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Genetics and Genomics
Buckner, Janet C
Sanders, Robert C
Faircloth, Brant C
Chakrabarty, Prosanta
The critical importance of vouchers in genomics
title The critical importance of vouchers in genomics
title_full The critical importance of vouchers in genomics
title_fullStr The critical importance of vouchers in genomics
title_full_unstemmed The critical importance of vouchers in genomics
title_short The critical importance of vouchers in genomics
title_sort critical importance of vouchers in genomics
topic Genetics and Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8186901/
https://www.ncbi.nlm.nih.gov/pubmed/34061026
http://dx.doi.org/10.7554/eLife.68264
work_keys_str_mv AT bucknerjanetc thecriticalimportanceofvouchersingenomics
AT sandersrobertc thecriticalimportanceofvouchersingenomics
AT fairclothbrantc thecriticalimportanceofvouchersingenomics
AT chakrabartyprosanta thecriticalimportanceofvouchersingenomics
AT bucknerjanetc criticalimportanceofvouchersingenomics
AT sandersrobertc criticalimportanceofvouchersingenomics
AT fairclothbrantc criticalimportanceofvouchersingenomics
AT chakrabartyprosanta criticalimportanceofvouchersingenomics