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Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors

To explore the application of computed tomography (CT)-enhanced radiomics for the risk-grade prediction of gastrointestinal stromal tumors (GIST). GIST patients (n = 292) confirmed by surgery or endoscopic pathology during June 2013–2019 were reviewed and categorized into low-grade (very low to low...

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Autores principales: Chu, Hairui, Pang, Peipei, He, Jian, Zhang, Desheng, Zhang, Mei, Qiu, Yingying, Li, Xiaofen, Lei, Pinggui, Fan, Bing, Xu, Rongchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8187426/
https://www.ncbi.nlm.nih.gov/pubmed/34103619
http://dx.doi.org/10.1038/s41598-021-91508-5
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author Chu, Hairui
Pang, Peipei
He, Jian
Zhang, Desheng
Zhang, Mei
Qiu, Yingying
Li, Xiaofen
Lei, Pinggui
Fan, Bing
Xu, Rongchun
author_facet Chu, Hairui
Pang, Peipei
He, Jian
Zhang, Desheng
Zhang, Mei
Qiu, Yingying
Li, Xiaofen
Lei, Pinggui
Fan, Bing
Xu, Rongchun
author_sort Chu, Hairui
collection PubMed
description To explore the application of computed tomography (CT)-enhanced radiomics for the risk-grade prediction of gastrointestinal stromal tumors (GIST). GIST patients (n = 292) confirmed by surgery or endoscopic pathology during June 2013–2019 were reviewed and categorized into low-grade (very low to low risk) and high-grade (medium to high risk) groups. The tumor region of interest (ROI) was depicted layer by layer on each patient’s enhanced CT venous phase images using the ITK-SNAP. The texture features were extracted using the Analysis Kit (AK) and then randomly divided into the training (n = 205) and test (n = 87) groups in a ratio of 7:3. After dimension reduction by the least absolute shrinkage and the selection operator algorithm (LASSO), a prediction model was constructed using the logistic regression method. The clinical data of the two groups were statistically analyzed, and the multivariate regression prediction model was constructed by using statistically significant features. The ROC curve was applied to evaluate the prediction performance of the proposed model. A radiomics-prediction model was constructed based on 10 characteristic parameters selected from 396 quantitative feature parameters extracted from the CT images. The proposed radiomics model exhibited effective risk-grade prediction of GIST. For the training group, the area under curve (AUC), sensitivity, specificity, and accuracy rate were 0.793 (95%CI: 0.733–0.854), 83.3%, 64.3%, and 72.7%, respectively; the corresponding values for the test group were 0.791 (95%CI: 0.696–0.886), 84.2%, 69.3%, and 75.9%, respectively. There were significant differences in age (t value: − 3.133, P = 0.008), maximum tumor diameter (Z value: − 12.163, P = 0.000) and tumor morphology (χ(2) value:10.409, P = 0.001) between the two groups, which were used to establish a clinical prediction model. The area under the receiver operating characteristic curve of the clinical model was 0.718 (95%CI: 0.659–0.776). The proposed CT-enhanced radiomics model exhibited better accuracy and effective performance than the clinical model, which can be used for the assessment of risk grades of GIST.
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spelling pubmed-81874262021-06-09 Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors Chu, Hairui Pang, Peipei He, Jian Zhang, Desheng Zhang, Mei Qiu, Yingying Li, Xiaofen Lei, Pinggui Fan, Bing Xu, Rongchun Sci Rep Article To explore the application of computed tomography (CT)-enhanced radiomics for the risk-grade prediction of gastrointestinal stromal tumors (GIST). GIST patients (n = 292) confirmed by surgery or endoscopic pathology during June 2013–2019 were reviewed and categorized into low-grade (very low to low risk) and high-grade (medium to high risk) groups. The tumor region of interest (ROI) was depicted layer by layer on each patient’s enhanced CT venous phase images using the ITK-SNAP. The texture features were extracted using the Analysis Kit (AK) and then randomly divided into the training (n = 205) and test (n = 87) groups in a ratio of 7:3. After dimension reduction by the least absolute shrinkage and the selection operator algorithm (LASSO), a prediction model was constructed using the logistic regression method. The clinical data of the two groups were statistically analyzed, and the multivariate regression prediction model was constructed by using statistically significant features. The ROC curve was applied to evaluate the prediction performance of the proposed model. A radiomics-prediction model was constructed based on 10 characteristic parameters selected from 396 quantitative feature parameters extracted from the CT images. The proposed radiomics model exhibited effective risk-grade prediction of GIST. For the training group, the area under curve (AUC), sensitivity, specificity, and accuracy rate were 0.793 (95%CI: 0.733–0.854), 83.3%, 64.3%, and 72.7%, respectively; the corresponding values for the test group were 0.791 (95%CI: 0.696–0.886), 84.2%, 69.3%, and 75.9%, respectively. There were significant differences in age (t value: − 3.133, P = 0.008), maximum tumor diameter (Z value: − 12.163, P = 0.000) and tumor morphology (χ(2) value:10.409, P = 0.001) between the two groups, which were used to establish a clinical prediction model. The area under the receiver operating characteristic curve of the clinical model was 0.718 (95%CI: 0.659–0.776). The proposed CT-enhanced radiomics model exhibited better accuracy and effective performance than the clinical model, which can be used for the assessment of risk grades of GIST. Nature Publishing Group UK 2021-06-08 /pmc/articles/PMC8187426/ /pubmed/34103619 http://dx.doi.org/10.1038/s41598-021-91508-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chu, Hairui
Pang, Peipei
He, Jian
Zhang, Desheng
Zhang, Mei
Qiu, Yingying
Li, Xiaofen
Lei, Pinggui
Fan, Bing
Xu, Rongchun
Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title_full Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title_fullStr Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title_full_unstemmed Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title_short Value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
title_sort value of radiomics model based on enhanced computed tomography in risk grade prediction of gastrointestinal stromal tumors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8187426/
https://www.ncbi.nlm.nih.gov/pubmed/34103619
http://dx.doi.org/10.1038/s41598-021-91508-5
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