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Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor

The timely and accurate detection of carbapenemase-producing Enterobacterales (CPE) is imperative to manage this worldwide problem in an effective fashion. Herein we addressed the question of whether the protons produced during imipenem hydrolysis could be detected using an ion sensitive field effec...

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Autores principales: Kotsakis, Stathis D., Miliotis, Georgios, Tzelepi, Eva, Tzouvelekis, Leonidas S., Miriagou, Vivi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8187427/
https://www.ncbi.nlm.nih.gov/pubmed/34103596
http://dx.doi.org/10.1038/s41598-021-91202-6
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author Kotsakis, Stathis D.
Miliotis, Georgios
Tzelepi, Eva
Tzouvelekis, Leonidas S.
Miriagou, Vivi
author_facet Kotsakis, Stathis D.
Miliotis, Georgios
Tzelepi, Eva
Tzouvelekis, Leonidas S.
Miriagou, Vivi
author_sort Kotsakis, Stathis D.
collection PubMed
description The timely and accurate detection of carbapenemase-producing Enterobacterales (CPE) is imperative to manage this worldwide problem in an effective fashion. Herein we addressed the question of whether the protons produced during imipenem hydrolysis could be detected using an ion sensitive field effect transistor (ISFET). Application of the methodology on enzyme preparations showed that the sensor is able to detect carbapenemases of the NDM, IMP, KPC and NMC-A types at low nanomolar concentrations while VIM and OXA-48 responded at levels above 100 nM. Similar results were obtained when CPE cell suspensions were tested; NDM, IMP, NMC-A and KPC producers caused fast reductions of the output potential. Reduction rates with VIM-type and especially OXA-48 producing strains were significantly lower. Based on results with selected CPEs and carbapenemase-negative enterobacteria, a threshold of 10 mV drop at 30 min was set. Applying this threshold, the method exhibited 100% sensitivity for NDM, IMP and KPC and 77.3% for VIM producers. The OXA-48-positive strains failed to pass the detection threshold. A wide variety of carbapenemase-negative control strains were all classified as negative (100% specificity). In conclusion, an ISFET-based approach may have the potential to be routinely used for non OXA-48-like CPE detection in the clinical laboratory.
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spelling pubmed-81874272021-06-09 Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor Kotsakis, Stathis D. Miliotis, Georgios Tzelepi, Eva Tzouvelekis, Leonidas S. Miriagou, Vivi Sci Rep Article The timely and accurate detection of carbapenemase-producing Enterobacterales (CPE) is imperative to manage this worldwide problem in an effective fashion. Herein we addressed the question of whether the protons produced during imipenem hydrolysis could be detected using an ion sensitive field effect transistor (ISFET). Application of the methodology on enzyme preparations showed that the sensor is able to detect carbapenemases of the NDM, IMP, KPC and NMC-A types at low nanomolar concentrations while VIM and OXA-48 responded at levels above 100 nM. Similar results were obtained when CPE cell suspensions were tested; NDM, IMP, NMC-A and KPC producers caused fast reductions of the output potential. Reduction rates with VIM-type and especially OXA-48 producing strains were significantly lower. Based on results with selected CPEs and carbapenemase-negative enterobacteria, a threshold of 10 mV drop at 30 min was set. Applying this threshold, the method exhibited 100% sensitivity for NDM, IMP and KPC and 77.3% for VIM producers. The OXA-48-positive strains failed to pass the detection threshold. A wide variety of carbapenemase-negative control strains were all classified as negative (100% specificity). In conclusion, an ISFET-based approach may have the potential to be routinely used for non OXA-48-like CPE detection in the clinical laboratory. Nature Publishing Group UK 2021-06-08 /pmc/articles/PMC8187427/ /pubmed/34103596 http://dx.doi.org/10.1038/s41598-021-91202-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kotsakis, Stathis D.
Miliotis, Georgios
Tzelepi, Eva
Tzouvelekis, Leonidas S.
Miriagou, Vivi
Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title_full Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title_fullStr Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title_full_unstemmed Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title_short Detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
title_sort detection of carbapenemase producing enterobacteria using an ion sensitive field effect transistor sensor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8187427/
https://www.ncbi.nlm.nih.gov/pubmed/34103596
http://dx.doi.org/10.1038/s41598-021-91202-6
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