Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case

PacBio and Illumina MiSeq platforms were used for genomic sequencing of a Leishmania (Leishmania) tropica strain isolated from a patient infected in Pakistan. PacBio assemblies were generated using Flye v2.4 and polished with MiSeq data. The results represent a considerable improvement of the curren...

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Autores principales: Unoarumhi, Yvette, Batra, Dhwani, Sheth, Mili, Narayanan, Vidhya, Lin, Wuling, Zheng, Yueli, Rowe, Lori A., Pohl, Jan, de Almeida, Marcos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188350/
https://www.ncbi.nlm.nih.gov/pubmed/34016685
http://dx.doi.org/10.1128/MRA.00842-20
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author Unoarumhi, Yvette
Batra, Dhwani
Sheth, Mili
Narayanan, Vidhya
Lin, Wuling
Zheng, Yueli
Rowe, Lori A.
Pohl, Jan
de Almeida, Marcos
author_facet Unoarumhi, Yvette
Batra, Dhwani
Sheth, Mili
Narayanan, Vidhya
Lin, Wuling
Zheng, Yueli
Rowe, Lori A.
Pohl, Jan
de Almeida, Marcos
author_sort Unoarumhi, Yvette
collection PubMed
description PacBio and Illumina MiSeq platforms were used for genomic sequencing of a Leishmania (Leishmania) tropica strain isolated from a patient infected in Pakistan. PacBio assemblies were generated using Flye v2.4 and polished with MiSeq data. The results represent a considerable improvement of the currently available genome sequences in the GenBank database.
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spelling pubmed-81883502021-06-28 Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case Unoarumhi, Yvette Batra, Dhwani Sheth, Mili Narayanan, Vidhya Lin, Wuling Zheng, Yueli Rowe, Lori A. Pohl, Jan de Almeida, Marcos Microbiol Resour Announc Genome Sequences PacBio and Illumina MiSeq platforms were used for genomic sequencing of a Leishmania (Leishmania) tropica strain isolated from a patient infected in Pakistan. PacBio assemblies were generated using Flye v2.4 and polished with MiSeq data. The results represent a considerable improvement of the currently available genome sequences in the GenBank database. American Society for Microbiology 2021-05-20 /pmc/articles/PMC8188350/ /pubmed/34016685 http://dx.doi.org/10.1128/MRA.00842-20 Text en Copyright © 2021 Unoarumhi et al. https://doi.org/10.1128/AuthorWarrantyLicense.v1This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.
spellingShingle Genome Sequences
Unoarumhi, Yvette
Batra, Dhwani
Sheth, Mili
Narayanan, Vidhya
Lin, Wuling
Zheng, Yueli
Rowe, Lori A.
Pohl, Jan
de Almeida, Marcos
Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title_full Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title_fullStr Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title_full_unstemmed Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title_short Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
title_sort chromosome-level genome sequence of leishmania (leishmania) tropica strain cdc216-162, isolated from an afghanistan clinical case
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188350/
https://www.ncbi.nlm.nih.gov/pubmed/34016685
http://dx.doi.org/10.1128/MRA.00842-20
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