Cargando…

Hybridization and introgression in sympatric and allopatric populations of four oak species

BACKGROUND: Hybridization and introgression are vital sources of novel genetic variation driving diversification during reticulated evolution. Quercus is an important model clade, having extraordinary diverse and abundant members in the Northern hemisphere, that are used to studying the introgressio...

Descripción completa

Detalles Bibliográficos
Autores principales: Li , Xuan, Wei, Gaoming, El-Kassaby, Yousry A., Fang, Yanming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188795/
https://www.ncbi.nlm.nih.gov/pubmed/34107871
http://dx.doi.org/10.1186/s12870-021-03007-4
_version_ 1783705397825110016
author Li , Xuan
Wei, Gaoming
El-Kassaby, Yousry A.
Fang, Yanming
author_facet Li , Xuan
Wei, Gaoming
El-Kassaby, Yousry A.
Fang, Yanming
author_sort Li , Xuan
collection PubMed
description BACKGROUND: Hybridization and introgression are vital sources of novel genetic variation driving diversification during reticulated evolution. Quercus is an important model clade, having extraordinary diverse and abundant members in the Northern hemisphere, that are used to studying the introgression of species boundaries and adaptive processes. China is the second-largest distribution center of Quercus, but there are limited studies on introgressive hybridization. RESULTS: Here, we screened 17 co-dominant nuclear microsatellite markers to investigate the hybridization and introgression of four oaks (Quercus acutissima, Quercus variabilis, Quercus fabri, and Quercus serrata) in 10 populations. We identified 361 alleles in the four-oak species across 17 loci, and all loci were characterized by high genetic variability (H(E) = 0.844–0.944) and moderate differentiation (F(ST) = 0.037–0.156) levels. A population differentiation analysis revealed the following: allopatric homologous (F(ST) = 0.064) < sympatric heterogeneous (F(ST) = 0.071) < allopatric heterogeneous (F(ST) = 0.084). A Bayesian admixture analysis determined four types of hybrids (Q. acutissima × Q. variabilis, Q. fabri × Q. serrata, Q. acutissima × Q. fabri, and Q. acutissima × Q. variabilis × Q. fabri) and their asymmetric introgression. Our results revealed that interspecific hybridization is commonly observed within the section Quercus, with members having tendency to hybridize. CONCLUSIONS: Our study determined the basic hybridization and introgression states among the studied four oak species and extended our understanding of the evolutionary role of hybridization. The results provide useful theoretical data for formulating conservation strategies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-021-03007-4.
format Online
Article
Text
id pubmed-8188795
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-81887952021-06-10 Hybridization and introgression in sympatric and allopatric populations of four oak species Li , Xuan Wei, Gaoming El-Kassaby, Yousry A. Fang, Yanming BMC Plant Biol Research Article BACKGROUND: Hybridization and introgression are vital sources of novel genetic variation driving diversification during reticulated evolution. Quercus is an important model clade, having extraordinary diverse and abundant members in the Northern hemisphere, that are used to studying the introgression of species boundaries and adaptive processes. China is the second-largest distribution center of Quercus, but there are limited studies on introgressive hybridization. RESULTS: Here, we screened 17 co-dominant nuclear microsatellite markers to investigate the hybridization and introgression of four oaks (Quercus acutissima, Quercus variabilis, Quercus fabri, and Quercus serrata) in 10 populations. We identified 361 alleles in the four-oak species across 17 loci, and all loci were characterized by high genetic variability (H(E) = 0.844–0.944) and moderate differentiation (F(ST) = 0.037–0.156) levels. A population differentiation analysis revealed the following: allopatric homologous (F(ST) = 0.064) < sympatric heterogeneous (F(ST) = 0.071) < allopatric heterogeneous (F(ST) = 0.084). A Bayesian admixture analysis determined four types of hybrids (Q. acutissima × Q. variabilis, Q. fabri × Q. serrata, Q. acutissima × Q. fabri, and Q. acutissima × Q. variabilis × Q. fabri) and their asymmetric introgression. Our results revealed that interspecific hybridization is commonly observed within the section Quercus, with members having tendency to hybridize. CONCLUSIONS: Our study determined the basic hybridization and introgression states among the studied four oak species and extended our understanding of the evolutionary role of hybridization. The results provide useful theoretical data for formulating conservation strategies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-021-03007-4. BioMed Central 2021-06-09 /pmc/articles/PMC8188795/ /pubmed/34107871 http://dx.doi.org/10.1186/s12870-021-03007-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Li , Xuan
Wei, Gaoming
El-Kassaby, Yousry A.
Fang, Yanming
Hybridization and introgression in sympatric and allopatric populations of four oak species
title Hybridization and introgression in sympatric and allopatric populations of four oak species
title_full Hybridization and introgression in sympatric and allopatric populations of four oak species
title_fullStr Hybridization and introgression in sympatric and allopatric populations of four oak species
title_full_unstemmed Hybridization and introgression in sympatric and allopatric populations of four oak species
title_short Hybridization and introgression in sympatric and allopatric populations of four oak species
title_sort hybridization and introgression in sympatric and allopatric populations of four oak species
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188795/
https://www.ncbi.nlm.nih.gov/pubmed/34107871
http://dx.doi.org/10.1186/s12870-021-03007-4
work_keys_str_mv AT lixuan hybridizationandintrogressioninsympatricandallopatricpopulationsoffouroakspecies
AT weigaoming hybridizationandintrogressioninsympatricandallopatricpopulationsoffouroakspecies
AT elkassabyyousrya hybridizationandintrogressioninsympatricandallopatricpopulationsoffouroakspecies
AT fangyanming hybridizationandintrogressioninsympatricandallopatricpopulationsoffouroakspecies