Cargando…
Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging
Herein we introduce a deep learning (DL) application engine (DLAE) system concept, present potential uses of it, and describe pathways for its integration in clinical workflows. An open-source software application was developed to provide a code-free approach to DL for medical imaging applications....
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188855/ https://www.ncbi.nlm.nih.gov/pubmed/34113706 http://dx.doi.org/10.1016/j.softx.2019.100347 |
_version_ | 1783705405223862272 |
---|---|
author | Sanders, Jeremiah W. Fletcher, Justin R. Frank, Steven J. Liu, Ho-Ling Johnson, Jason M. Zhou, Zijian Chen, Henry Szu-Meng Venkatesan, Aradhana M. Kudchadker, Rajat J. Pagel, Mark D. Ma, Jingfei |
author_facet | Sanders, Jeremiah W. Fletcher, Justin R. Frank, Steven J. Liu, Ho-Ling Johnson, Jason M. Zhou, Zijian Chen, Henry Szu-Meng Venkatesan, Aradhana M. Kudchadker, Rajat J. Pagel, Mark D. Ma, Jingfei |
author_sort | Sanders, Jeremiah W. |
collection | PubMed |
description | Herein we introduce a deep learning (DL) application engine (DLAE) system concept, present potential uses of it, and describe pathways for its integration in clinical workflows. An open-source software application was developed to provide a code-free approach to DL for medical imaging applications. DLAE supports several DL techniques used in medical imaging, including convolutional neural networks, fully convolutional networks, generative adversarial networks, and bounding box detectors. Several example applications using clinical images were developed and tested to demonstrate the capabilities of DLAE. Additionally, a model deployment example was demonstrated in which DLAE was used to integrate two trained models into a commercial clinical software package. |
format | Online Article Text |
id | pubmed-8188855 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
record_format | MEDLINE/PubMed |
spelling | pubmed-81888552021-06-09 Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging Sanders, Jeremiah W. Fletcher, Justin R. Frank, Steven J. Liu, Ho-Ling Johnson, Jason M. Zhou, Zijian Chen, Henry Szu-Meng Venkatesan, Aradhana M. Kudchadker, Rajat J. Pagel, Mark D. Ma, Jingfei SoftwareX Article Herein we introduce a deep learning (DL) application engine (DLAE) system concept, present potential uses of it, and describe pathways for its integration in clinical workflows. An open-source software application was developed to provide a code-free approach to DL for medical imaging applications. DLAE supports several DL techniques used in medical imaging, including convolutional neural networks, fully convolutional networks, generative adversarial networks, and bounding box detectors. Several example applications using clinical images were developed and tested to demonstrate the capabilities of DLAE. Additionally, a model deployment example was demonstrated in which DLAE was used to integrate two trained models into a commercial clinical software package. 2019-10-29 2019 /pmc/articles/PMC8188855/ /pubmed/34113706 http://dx.doi.org/10.1016/j.softx.2019.100347 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Sanders, Jeremiah W. Fletcher, Justin R. Frank, Steven J. Liu, Ho-Ling Johnson, Jason M. Zhou, Zijian Chen, Henry Szu-Meng Venkatesan, Aradhana M. Kudchadker, Rajat J. Pagel, Mark D. Ma, Jingfei Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title | Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title_full | Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title_fullStr | Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title_full_unstemmed | Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title_short | Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging |
title_sort | deep learning application engine (dlae): development and integration of deep learning algorithms in medical imaging |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8188855/ https://www.ncbi.nlm.nih.gov/pubmed/34113706 http://dx.doi.org/10.1016/j.softx.2019.100347 |
work_keys_str_mv | AT sandersjeremiahw deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT fletcherjustinr deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT frankstevenj deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT liuholing deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT johnsonjasonm deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT zhouzijian deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT chenhenryszumeng deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT venkatesanaradhanam deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT kudchadkerrajatj deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT pagelmarkd deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging AT majingfei deeplearningapplicationenginedlaedevelopmentandintegrationofdeeplearningalgorithmsinmedicalimaging |