Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)

Sabia parviflora Wall. ex Roxb., an evergreen climbing woody vine, is a Chinese herbal medicine commonly used by ethnic minorities in some areas of China. In this study, the chloroplast genome of S. parviflora was sequenced for the first time. Its genome is 162,054 bp in length with 38.6% of GC cont...

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Autores principales: Chen, Qiyu, Xu, Wenfen, Zhao, Chao, Wang, Bo, Chen, Chunling, Liu, Qu, Sun, Qingwen, Huang, Yuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8189099/
https://www.ncbi.nlm.nih.gov/pubmed/34151017
http://dx.doi.org/10.1080/23802359.2021.1935350
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author Chen, Qiyu
Xu, Wenfen
Zhao, Chao
Wang, Bo
Chen, Chunling
Liu, Qu
Sun, Qingwen
Huang, Yuan
author_facet Chen, Qiyu
Xu, Wenfen
Zhao, Chao
Wang, Bo
Chen, Chunling
Liu, Qu
Sun, Qingwen
Huang, Yuan
author_sort Chen, Qiyu
collection PubMed
description Sabia parviflora Wall. ex Roxb., an evergreen climbing woody vine, is a Chinese herbal medicine commonly used by ethnic minorities in some areas of China. In this study, the chloroplast genome of S. parviflora was sequenced for the first time. Its genome is 162,054 bp in length with 38.6% of GC content. The genome consists of a large single copy (LSC) region of 90,001 bp, a small single copy (SSC) region of 18,887 bp, and two inverted repeat (IRa and IRb) regions of 26,583 bp each. A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was conducted by nine species from order Proteales, which demonstrated a close relationship between the family Sabiaceae and Nelumbonaceae.
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spelling pubmed-81890992021-06-17 Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae) Chen, Qiyu Xu, Wenfen Zhao, Chao Wang, Bo Chen, Chunling Liu, Qu Sun, Qingwen Huang, Yuan Mitochondrial DNA B Resour Mitogenome Announcement Sabia parviflora Wall. ex Roxb., an evergreen climbing woody vine, is a Chinese herbal medicine commonly used by ethnic minorities in some areas of China. In this study, the chloroplast genome of S. parviflora was sequenced for the first time. Its genome is 162,054 bp in length with 38.6% of GC content. The genome consists of a large single copy (LSC) region of 90,001 bp, a small single copy (SSC) region of 18,887 bp, and two inverted repeat (IRa and IRb) regions of 26,583 bp each. A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was conducted by nine species from order Proteales, which demonstrated a close relationship between the family Sabiaceae and Nelumbonaceae. Taylor & Francis 2021-06-07 /pmc/articles/PMC8189099/ /pubmed/34151017 http://dx.doi.org/10.1080/23802359.2021.1935350 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Qiyu
Xu, Wenfen
Zhao, Chao
Wang, Bo
Chen, Chunling
Liu, Qu
Sun, Qingwen
Huang, Yuan
Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title_full Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title_fullStr Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title_full_unstemmed Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title_short Complete chloroplast genome of medicinal plant Sabia parviflora Wall. ex Roxb. (Sabiaceae)
title_sort complete chloroplast genome of medicinal plant sabia parviflora wall. ex roxb. (sabiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8189099/
https://www.ncbi.nlm.nih.gov/pubmed/34151017
http://dx.doi.org/10.1080/23802359.2021.1935350
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