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Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis
BACKGROUND: Although more and more evidence has supported psoriasis is prone to atherosclerosis, the common mechanism of its occurrence is still not fully elucidated. The purpose of this study is to further explore the molecular mechanism of the occurrence of this complication. METHODS: The gene exp...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190392/ https://www.ncbi.nlm.nih.gov/pubmed/34122426 http://dx.doi.org/10.3389/fimmu.2021.667690 |
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author | Su, Wenxing Zhao, Ying Wei, Yuqian Zhang, Xiaoyan Ji, Jiang Yang, Shun |
author_facet | Su, Wenxing Zhao, Ying Wei, Yuqian Zhang, Xiaoyan Ji, Jiang Yang, Shun |
author_sort | Su, Wenxing |
collection | PubMed |
description | BACKGROUND: Although more and more evidence has supported psoriasis is prone to atherosclerosis, the common mechanism of its occurrence is still not fully elucidated. The purpose of this study is to further explore the molecular mechanism of the occurrence of this complication. METHODS: The gene expression profiles of psoriasis (GSE30999) and atherosclerosis (GSE28829) were downloaded from the Gene Expression Omnibus (GEO) database. After identifying the common differentially expressed genes (DEGs) of psoriasis and atherosclerosis, three kinds of analyses were performed, namely functional annotation, protein‐protein interaction (PPI) network and module construction, and hub gene identification and co-expression analysis. RESULTS: A total of 94 common DEGs (24 downregulated genes and 70 upregulated genes) was selected for subsequent analyses. Functional analysis emphasizes the important role of chemokines and cytokines in these two diseases. In addition, lipopolysaccharide-mediated signaling pathway is closely related to both. Finally, 16 important hub genes were identified using cytoHubba, including LYN, CSF2RB, IL1RN, RAC2, CCL5, IRF8, C1QB, MMP9, PLEK, PTPRC, FYB, BCL2A1, LCP2, CD53, NCF2 and TLR2. CONCLUSIONS: Our study reveals the common pathogenesis of psoriasis and atherosclerosis. These common pathways and hub genes may provide new ideas for further mechanism research. |
format | Online Article Text |
id | pubmed-8190392 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81903922021-06-11 Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis Su, Wenxing Zhao, Ying Wei, Yuqian Zhang, Xiaoyan Ji, Jiang Yang, Shun Front Immunol Immunology BACKGROUND: Although more and more evidence has supported psoriasis is prone to atherosclerosis, the common mechanism of its occurrence is still not fully elucidated. The purpose of this study is to further explore the molecular mechanism of the occurrence of this complication. METHODS: The gene expression profiles of psoriasis (GSE30999) and atherosclerosis (GSE28829) were downloaded from the Gene Expression Omnibus (GEO) database. After identifying the common differentially expressed genes (DEGs) of psoriasis and atherosclerosis, three kinds of analyses were performed, namely functional annotation, protein‐protein interaction (PPI) network and module construction, and hub gene identification and co-expression analysis. RESULTS: A total of 94 common DEGs (24 downregulated genes and 70 upregulated genes) was selected for subsequent analyses. Functional analysis emphasizes the important role of chemokines and cytokines in these two diseases. In addition, lipopolysaccharide-mediated signaling pathway is closely related to both. Finally, 16 important hub genes were identified using cytoHubba, including LYN, CSF2RB, IL1RN, RAC2, CCL5, IRF8, C1QB, MMP9, PLEK, PTPRC, FYB, BCL2A1, LCP2, CD53, NCF2 and TLR2. CONCLUSIONS: Our study reveals the common pathogenesis of psoriasis and atherosclerosis. These common pathways and hub genes may provide new ideas for further mechanism research. Frontiers Media S.A. 2021-05-27 /pmc/articles/PMC8190392/ /pubmed/34122426 http://dx.doi.org/10.3389/fimmu.2021.667690 Text en Copyright © 2021 Su, Zhao, Wei, Zhang, Ji and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Su, Wenxing Zhao, Ying Wei, Yuqian Zhang, Xiaoyan Ji, Jiang Yang, Shun Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title | Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title_full | Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title_fullStr | Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title_full_unstemmed | Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title_short | Exploring the Pathogenesis of Psoriasis Complicated With Atherosclerosis via Microarray Data Analysis |
title_sort | exploring the pathogenesis of psoriasis complicated with atherosclerosis via microarray data analysis |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190392/ https://www.ncbi.nlm.nih.gov/pubmed/34122426 http://dx.doi.org/10.3389/fimmu.2021.667690 |
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