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A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England

Klebsiella species occupy a wide range of environmental and animal niches, and occasionally cause opportunistic infections that are resistant to multiple antibiotics. In particular, Klebsiella pneumoniae (Kpne) has gained notoriety as a major nosocomial pathogen, due principally to the rise in non-s...

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Autores principales: Gibbon, Marjorie J., Couto, Natacha, David, Sophia, Barden, Ruth, Standerwick, Richard, Jagadeesan, Kishore, Birkwood, Hollie, Dulyayangkul, Punyawee, Avison, Matthew B., Kannan, Andrew, Kibbey, Dan, Craft, Tim, Habib, Samia, Thorpe, Harry A., Corander, Jukka, Kasprzyk-Hordern, Barbara, Feil, Edward J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190614/
https://www.ncbi.nlm.nih.gov/pubmed/33416467
http://dx.doi.org/10.1099/mgen.0.000509
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author Gibbon, Marjorie J.
Couto, Natacha
David, Sophia
Barden, Ruth
Standerwick, Richard
Jagadeesan, Kishore
Birkwood, Hollie
Dulyayangkul, Punyawee
Avison, Matthew B.
Kannan, Andrew
Kibbey, Dan
Craft, Tim
Habib, Samia
Thorpe, Harry A.
Corander, Jukka
Kasprzyk-Hordern, Barbara
Feil, Edward J.
author_facet Gibbon, Marjorie J.
Couto, Natacha
David, Sophia
Barden, Ruth
Standerwick, Richard
Jagadeesan, Kishore
Birkwood, Hollie
Dulyayangkul, Punyawee
Avison, Matthew B.
Kannan, Andrew
Kibbey, Dan
Craft, Tim
Habib, Samia
Thorpe, Harry A.
Corander, Jukka
Kasprzyk-Hordern, Barbara
Feil, Edward J.
author_sort Gibbon, Marjorie J.
collection PubMed
description Klebsiella species occupy a wide range of environmental and animal niches, and occasionally cause opportunistic infections that are resistant to multiple antibiotics. In particular, Klebsiella pneumoniae (Kpne) has gained notoriety as a major nosocomial pathogen, due principally to the rise in non-susceptibility to carbapenems and other beta-lactam antibiotics. Whilst it has been proposed that the urban water cycle facilitates transmission of pathogens between clinical settings and the environment, the level of risk posed by resistant Klebsiella strains in hospital wastewater remains unclear. We used whole genome sequencing (WGS) to compare Klebsiella species in contemporaneous samples of wastewater from an English hospital and influent to the associated wastewater treatment plant (WWTP). As we aimed to characterize representative samples of Klebsiella communities, we did not actively select for antibiotic resistance (other than for ampicillin), nor for specific Klebsiella species. Two species, Kpne and K. ( Raoultella ) ornithinolytica (Korn), were of equal dominance in the hospital wastewater, and four other Klebsiella species were present in low abundance in this sample. In contrast, despite being the species most closely associated with healthcare settings, Kpne was the dominant species within the WWTP influent. In total, 29 % of all isolates harboured the bla (OXA-48) gene on a pOXA-48-like plasmid, and these isolates were almost exclusively recovered from the hospital wastewater. This gene was far more common in Korn (68 % of isolates) than in Kpne (3.4 % of isolates). In general plasmid-borne, but not chromosomal, resistance genes were significantly enriched in the hospital wastewater sample. These data implicate hospital wastewater as an important reservoir for antibiotic-resistant Klebsiella , and point to an unsuspected role of species within the Raoultella group in the maintenance and dissemination of plasmid-borne bla (OXA-48). This article contains data hosted by Microreact.
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spelling pubmed-81906142021-06-10 A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England Gibbon, Marjorie J. Couto, Natacha David, Sophia Barden, Ruth Standerwick, Richard Jagadeesan, Kishore Birkwood, Hollie Dulyayangkul, Punyawee Avison, Matthew B. Kannan, Andrew Kibbey, Dan Craft, Tim Habib, Samia Thorpe, Harry A. Corander, Jukka Kasprzyk-Hordern, Barbara Feil, Edward J. Microb Genom Research Articles Klebsiella species occupy a wide range of environmental and animal niches, and occasionally cause opportunistic infections that are resistant to multiple antibiotics. In particular, Klebsiella pneumoniae (Kpne) has gained notoriety as a major nosocomial pathogen, due principally to the rise in non-susceptibility to carbapenems and other beta-lactam antibiotics. Whilst it has been proposed that the urban water cycle facilitates transmission of pathogens between clinical settings and the environment, the level of risk posed by resistant Klebsiella strains in hospital wastewater remains unclear. We used whole genome sequencing (WGS) to compare Klebsiella species in contemporaneous samples of wastewater from an English hospital and influent to the associated wastewater treatment plant (WWTP). As we aimed to characterize representative samples of Klebsiella communities, we did not actively select for antibiotic resistance (other than for ampicillin), nor for specific Klebsiella species. Two species, Kpne and K. ( Raoultella ) ornithinolytica (Korn), were of equal dominance in the hospital wastewater, and four other Klebsiella species were present in low abundance in this sample. In contrast, despite being the species most closely associated with healthcare settings, Kpne was the dominant species within the WWTP influent. In total, 29 % of all isolates harboured the bla (OXA-48) gene on a pOXA-48-like plasmid, and these isolates were almost exclusively recovered from the hospital wastewater. This gene was far more common in Korn (68 % of isolates) than in Kpne (3.4 % of isolates). In general plasmid-borne, but not chromosomal, resistance genes were significantly enriched in the hospital wastewater sample. These data implicate hospital wastewater as an important reservoir for antibiotic-resistant Klebsiella , and point to an unsuspected role of species within the Raoultella group in the maintenance and dissemination of plasmid-borne bla (OXA-48). This article contains data hosted by Microreact. Microbiology Society 2021-01-08 /pmc/articles/PMC8190614/ /pubmed/33416467 http://dx.doi.org/10.1099/mgen.0.000509 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution.
spellingShingle Research Articles
Gibbon, Marjorie J.
Couto, Natacha
David, Sophia
Barden, Ruth
Standerwick, Richard
Jagadeesan, Kishore
Birkwood, Hollie
Dulyayangkul, Punyawee
Avison, Matthew B.
Kannan, Andrew
Kibbey, Dan
Craft, Tim
Habib, Samia
Thorpe, Harry A.
Corander, Jukka
Kasprzyk-Hordern, Barbara
Feil, Edward J.
A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title_full A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title_fullStr A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title_full_unstemmed A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title_short A high prevalence of bla (OXA-48) in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England
title_sort high prevalence of bla (oxa-48) in klebsiella (raoultella) ornithinolytica and related species in hospital wastewater in south west england
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190614/
https://www.ncbi.nlm.nih.gov/pubmed/33416467
http://dx.doi.org/10.1099/mgen.0.000509
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