Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods

Whole genome sequencing (WGS) enables complete characterization of bacterial pathogenic isolates at single nucleotide resolution, making it the ultimate tool for routine surveillance and outbreak investigation. The lack of standardization, and the variation regarding bioinformatics workflows and par...

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Detalles Bibliográficos
Autores principales: Bogaerts, Bert, Nouws, Stéphanie, Verhaegen, Bavo, Denayer, Sarah, Van Braekel, Julien, Winand, Raf, Fu, Qiang, Crombé, Florence, Piérard, Denis, Marchal, Kathleen, Roosens, Nancy H. C., De Keersmaecker, Sigrid C. J., Vanneste, Kevin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2021
Materias:
Research Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190621/
https://www.ncbi.nlm.nih.gov/pubmed/33656437
http://dx.doi.org/10.1099/mgen.0.000531

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190621/
https://www.ncbi.nlm.nih.gov/pubmed/33656437
http://dx.doi.org/10.1099/mgen.0.000531

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