Cargando…

Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children

OBJECTIVE: The present study was designed to investigate whether the extracellular signal-regulated kinase (ERK) signaling pathway, a downstream component of dopamine signaling, is involved in myopia among Chinese children. METHODS: During a 3.5-year follow-up, 488 primary school students were enrol...

Descripción completa

Detalles Bibliográficos
Autores principales: Xiao, Haishao, Lin, Shudan, Jiang, Dandan, Lin, Yaoyao, Liu, Linjie, Zhang, Qiqi, He, Juan, Chen, Yanyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191505/
https://www.ncbi.nlm.nih.gov/pubmed/34122509
http://dx.doi.org/10.3389/fgene.2021.654869
_version_ 1783705880928190464
author Xiao, Haishao
Lin, Shudan
Jiang, Dandan
Lin, Yaoyao
Liu, Linjie
Zhang, Qiqi
He, Juan
Chen, Yanyan
author_facet Xiao, Haishao
Lin, Shudan
Jiang, Dandan
Lin, Yaoyao
Liu, Linjie
Zhang, Qiqi
He, Juan
Chen, Yanyan
author_sort Xiao, Haishao
collection PubMed
description OBJECTIVE: The present study was designed to investigate whether the extracellular signal-regulated kinase (ERK) signaling pathway, a downstream component of dopamine signaling, is involved in myopia among Chinese children. METHODS: During a 3.5-year follow-up, 488 primary school students were enrolled in this study. Non-cycloplegic spherical equivalent refraction (SE) and other ocular parameters were assessed. Four variants of four genes in the ERK signaling pathway were selected: RASGRF1 rs6495367, PTPN5 rs1550870, PTPRR rs11178469, and PDGFRA rs6554163. SNPscan was used to genotype single-nucleotide polymorphisms (SNPs). PLINK software was used to assess the associations of the genetic variants with the occurrence or development of myopia, SE, and other ocular parameters. We created a protein-protein interaction (PPI) network and microRNA (miRNA)-gene network using String and Cytoscape and conducted enrichment analyses on the genes in these networks. RESULTS: In total, 426 children (baseline age: 7.28 ± 0.26 years; 236 (55.4%) boys and 190 girls) wereenrolled. After adjusting for confounding factors with 10,000 permutations, children with the CT or TT genotype of PTPN5 rs1550870 were more susceptible to myopia than those with the CC genotype (adjusted p = 0.011). Additionally, PTPN5 rs1550870 was correlated with significant myopic shift and increasing axial length (AL) and lens thickness (LT) but had a negative effect on central corneal thickness (CCT). RASGRF1 rs6495367 was negatively associated with myopic shift (additive: adjusted p = 0.034; dominant: adjusted p = 0.020), myopic SE and AL. PDGFRA rs6554163 TA or AA was negatively associated with increasing LT (adjusted p = 0.033). Evaluation of the effects of SNP-SNP combinations on incident myopia revealed a statistically significant one-locus model: PTPN5 rs1550870 [cross-validation consistency (CVC) = 10/10, adjusted p = 0.0107]. The genes in the PPI and miRNA-gene interaction networks were subjected to enrichment analyses, which suggested that these genes are involved mainly in eye development and dopaminergic synapse-related processes. CONCLUSION: We identified genetic variants of crucial ERK signaling pathway genes that were significantly correlated with myopia and ocular parameter alterations in Chinese children. A combination of gene and miRNA functional analyses with enrichment analyses highlights the regulatory effects associated with ocular development and dopamine biological functions. This study offers novel clues to understand the role of dopamine in the molecular mechanisms of myopia.
format Online
Article
Text
id pubmed-8191505
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-81915052021-06-11 Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children Xiao, Haishao Lin, Shudan Jiang, Dandan Lin, Yaoyao Liu, Linjie Zhang, Qiqi He, Juan Chen, Yanyan Front Genet Genetics OBJECTIVE: The present study was designed to investigate whether the extracellular signal-regulated kinase (ERK) signaling pathway, a downstream component of dopamine signaling, is involved in myopia among Chinese children. METHODS: During a 3.5-year follow-up, 488 primary school students were enrolled in this study. Non-cycloplegic spherical equivalent refraction (SE) and other ocular parameters were assessed. Four variants of four genes in the ERK signaling pathway were selected: RASGRF1 rs6495367, PTPN5 rs1550870, PTPRR rs11178469, and PDGFRA rs6554163. SNPscan was used to genotype single-nucleotide polymorphisms (SNPs). PLINK software was used to assess the associations of the genetic variants with the occurrence or development of myopia, SE, and other ocular parameters. We created a protein-protein interaction (PPI) network and microRNA (miRNA)-gene network using String and Cytoscape and conducted enrichment analyses on the genes in these networks. RESULTS: In total, 426 children (baseline age: 7.28 ± 0.26 years; 236 (55.4%) boys and 190 girls) wereenrolled. After adjusting for confounding factors with 10,000 permutations, children with the CT or TT genotype of PTPN5 rs1550870 were more susceptible to myopia than those with the CC genotype (adjusted p = 0.011). Additionally, PTPN5 rs1550870 was correlated with significant myopic shift and increasing axial length (AL) and lens thickness (LT) but had a negative effect on central corneal thickness (CCT). RASGRF1 rs6495367 was negatively associated with myopic shift (additive: adjusted p = 0.034; dominant: adjusted p = 0.020), myopic SE and AL. PDGFRA rs6554163 TA or AA was negatively associated with increasing LT (adjusted p = 0.033). Evaluation of the effects of SNP-SNP combinations on incident myopia revealed a statistically significant one-locus model: PTPN5 rs1550870 [cross-validation consistency (CVC) = 10/10, adjusted p = 0.0107]. The genes in the PPI and miRNA-gene interaction networks were subjected to enrichment analyses, which suggested that these genes are involved mainly in eye development and dopaminergic synapse-related processes. CONCLUSION: We identified genetic variants of crucial ERK signaling pathway genes that were significantly correlated with myopia and ocular parameter alterations in Chinese children. A combination of gene and miRNA functional analyses with enrichment analyses highlights the regulatory effects associated with ocular development and dopamine biological functions. This study offers novel clues to understand the role of dopamine in the molecular mechanisms of myopia. Frontiers Media S.A. 2021-05-27 /pmc/articles/PMC8191505/ /pubmed/34122509 http://dx.doi.org/10.3389/fgene.2021.654869 Text en Copyright © 2021 Xiao, Lin, Jiang, Lin, Liu, Zhang, He and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Xiao, Haishao
Lin, Shudan
Jiang, Dandan
Lin, Yaoyao
Liu, Linjie
Zhang, Qiqi
He, Juan
Chen, Yanyan
Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title_full Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title_fullStr Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title_full_unstemmed Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title_short Association of Extracellular Signal-Regulated Kinase Genes With Myopia: A Longitudinal Study of Chinese Children
title_sort association of extracellular signal-regulated kinase genes with myopia: a longitudinal study of chinese children
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191505/
https://www.ncbi.nlm.nih.gov/pubmed/34122509
http://dx.doi.org/10.3389/fgene.2021.654869
work_keys_str_mv AT xiaohaishao associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT linshudan associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT jiangdandan associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT linyaoyao associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT liulinjie associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT zhangqiqi associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT hejuan associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren
AT chenyanyan associationofextracellularsignalregulatedkinasegeneswithmyopiaalongitudinalstudyofchinesechildren