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Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients

In this work, we aimed to develop an automatic algorithm for the quantification of total volume and lung impairments in four different diseases. The quantification was completely automatic based upon high resolution computed tomography exams. The algorithm was capable of measuring volume and differe...

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Autores principales: Alves, Allan Felipe Fattori, Miranda, José Ricardo Arruda, Reis, Fabiano, Oliveira, Abner Alves, Souza, Sérgio Augusto Santana, Fortaleza, Carlos Magno Castelo Branco, Tanni, Suzana Erico, Castro, José Thiago Souza, Pina, Diana Rodrigues
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191897/
https://www.ncbi.nlm.nih.gov/pubmed/34111131
http://dx.doi.org/10.1371/journal.pone.0251783
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author Alves, Allan Felipe Fattori
Miranda, José Ricardo Arruda
Reis, Fabiano
Oliveira, Abner Alves
Souza, Sérgio Augusto Santana
Fortaleza, Carlos Magno Castelo Branco
Tanni, Suzana Erico
Castro, José Thiago Souza
Pina, Diana Rodrigues
author_facet Alves, Allan Felipe Fattori
Miranda, José Ricardo Arruda
Reis, Fabiano
Oliveira, Abner Alves
Souza, Sérgio Augusto Santana
Fortaleza, Carlos Magno Castelo Branco
Tanni, Suzana Erico
Castro, José Thiago Souza
Pina, Diana Rodrigues
author_sort Alves, Allan Felipe Fattori
collection PubMed
description In this work, we aimed to develop an automatic algorithm for the quantification of total volume and lung impairments in four different diseases. The quantification was completely automatic based upon high resolution computed tomography exams. The algorithm was capable of measuring volume and differentiating pulmonary involvement including inflammatory process and fibrosis, emphysema, and ground-glass opacities. The algorithm classifies the percentage of each pulmonary involvement when compared to the entire lung volume. Our algorithm was applied to four different patients groups: no lung disease patients, patients diagnosed with SARS-CoV-2, patients with chronic obstructive pulmonary disease, and patients with paracoccidioidomycosis. The quantification results were compared with a semi-automatic algorithm previously validated. Results confirmed that the automatic approach has a good agreement with the semi-automatic. Bland-Altman (B&A) demonstrated a low dispersion when comparing total lung volume, and also when comparing each lung impairment individually. Linear regression adjustment achieved an R value of 0.81 when comparing total lung volume between both methods. Our approach provides a reliable quantification process for physicians, thus impairments measurements contributes to support prognostic decisions in important lung diseases including the infection of SARS-CoV-2.
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spelling pubmed-81918972021-06-10 Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients Alves, Allan Felipe Fattori Miranda, José Ricardo Arruda Reis, Fabiano Oliveira, Abner Alves Souza, Sérgio Augusto Santana Fortaleza, Carlos Magno Castelo Branco Tanni, Suzana Erico Castro, José Thiago Souza Pina, Diana Rodrigues PLoS One Research Article In this work, we aimed to develop an automatic algorithm for the quantification of total volume and lung impairments in four different diseases. The quantification was completely automatic based upon high resolution computed tomography exams. The algorithm was capable of measuring volume and differentiating pulmonary involvement including inflammatory process and fibrosis, emphysema, and ground-glass opacities. The algorithm classifies the percentage of each pulmonary involvement when compared to the entire lung volume. Our algorithm was applied to four different patients groups: no lung disease patients, patients diagnosed with SARS-CoV-2, patients with chronic obstructive pulmonary disease, and patients with paracoccidioidomycosis. The quantification results were compared with a semi-automatic algorithm previously validated. Results confirmed that the automatic approach has a good agreement with the semi-automatic. Bland-Altman (B&A) demonstrated a low dispersion when comparing total lung volume, and also when comparing each lung impairment individually. Linear regression adjustment achieved an R value of 0.81 when comparing total lung volume between both methods. Our approach provides a reliable quantification process for physicians, thus impairments measurements contributes to support prognostic decisions in important lung diseases including the infection of SARS-CoV-2. Public Library of Science 2021-06-10 /pmc/articles/PMC8191897/ /pubmed/34111131 http://dx.doi.org/10.1371/journal.pone.0251783 Text en © 2021 Alves et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Alves, Allan Felipe Fattori
Miranda, José Ricardo Arruda
Reis, Fabiano
Oliveira, Abner Alves
Souza, Sérgio Augusto Santana
Fortaleza, Carlos Magno Castelo Branco
Tanni, Suzana Erico
Castro, José Thiago Souza
Pina, Diana Rodrigues
Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title_full Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title_fullStr Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title_full_unstemmed Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title_short Automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with SARS-CoV-2, paracoccidioidomycosis and no lung disease patients
title_sort automatic algorithm for quantifying lung involvement in patients with chronic obstructive pulmonary disease, infection with sars-cov-2, paracoccidioidomycosis and no lung disease patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191897/
https://www.ncbi.nlm.nih.gov/pubmed/34111131
http://dx.doi.org/10.1371/journal.pone.0251783
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