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Automatic ladybird beetle detection using deep-learning models

Fast and accurate taxonomic identification of invasive trans-located ladybird beetle species is essential to prevent significant impacts on biological communities, ecosystem functions, and agricultural business economics. Therefore, in this work we propose a two-step automatic detector for ladybird...

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Autores principales: Venegas, Pablo, Calderon, Francisco, Riofrío, Daniel, Benítez, Diego, Ramón, Giovani, Cisneros-Heredia, Diego, Coimbra, Miguel, Rojo-Álvarez, José Luis, Pérez, Noel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191954/
https://www.ncbi.nlm.nih.gov/pubmed/34111201
http://dx.doi.org/10.1371/journal.pone.0253027
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author Venegas, Pablo
Calderon, Francisco
Riofrío, Daniel
Benítez, Diego
Ramón, Giovani
Cisneros-Heredia, Diego
Coimbra, Miguel
Rojo-Álvarez, José Luis
Pérez, Noel
author_facet Venegas, Pablo
Calderon, Francisco
Riofrío, Daniel
Benítez, Diego
Ramón, Giovani
Cisneros-Heredia, Diego
Coimbra, Miguel
Rojo-Álvarez, José Luis
Pérez, Noel
author_sort Venegas, Pablo
collection PubMed
description Fast and accurate taxonomic identification of invasive trans-located ladybird beetle species is essential to prevent significant impacts on biological communities, ecosystem functions, and agricultural business economics. Therefore, in this work we propose a two-step automatic detector for ladybird beetles in random environment images as the first stage towards an automated classification system. First, an image processing module composed of a saliency map representation, simple linear iterative clustering superpixels segmentation, and active contour methods allowed us to generate bounding boxes with possible ladybird beetles locations within an image. Subsequently, a deep convolutional neural network-based classifier selects only the bounding boxes with ladybird beetles as the final output. This method was validated on a 2, 300 ladybird beetle image data set from Ecuador and Colombia obtained from the iNaturalist project. The proposed approach achieved an accuracy score of 92% and an area under the receiver operating characteristic curve of 0.977 for the bounding box generation and classification tasks. These successful results enable the proposed detector as a valuable tool for helping specialists in the ladybird beetle detection problem.
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spelling pubmed-81919542021-06-10 Automatic ladybird beetle detection using deep-learning models Venegas, Pablo Calderon, Francisco Riofrío, Daniel Benítez, Diego Ramón, Giovani Cisneros-Heredia, Diego Coimbra, Miguel Rojo-Álvarez, José Luis Pérez, Noel PLoS One Research Article Fast and accurate taxonomic identification of invasive trans-located ladybird beetle species is essential to prevent significant impacts on biological communities, ecosystem functions, and agricultural business economics. Therefore, in this work we propose a two-step automatic detector for ladybird beetles in random environment images as the first stage towards an automated classification system. First, an image processing module composed of a saliency map representation, simple linear iterative clustering superpixels segmentation, and active contour methods allowed us to generate bounding boxes with possible ladybird beetles locations within an image. Subsequently, a deep convolutional neural network-based classifier selects only the bounding boxes with ladybird beetles as the final output. This method was validated on a 2, 300 ladybird beetle image data set from Ecuador and Colombia obtained from the iNaturalist project. The proposed approach achieved an accuracy score of 92% and an area under the receiver operating characteristic curve of 0.977 for the bounding box generation and classification tasks. These successful results enable the proposed detector as a valuable tool for helping specialists in the ladybird beetle detection problem. Public Library of Science 2021-06-10 /pmc/articles/PMC8191954/ /pubmed/34111201 http://dx.doi.org/10.1371/journal.pone.0253027 Text en © 2021 Venegas et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Venegas, Pablo
Calderon, Francisco
Riofrío, Daniel
Benítez, Diego
Ramón, Giovani
Cisneros-Heredia, Diego
Coimbra, Miguel
Rojo-Álvarez, José Luis
Pérez, Noel
Automatic ladybird beetle detection using deep-learning models
title Automatic ladybird beetle detection using deep-learning models
title_full Automatic ladybird beetle detection using deep-learning models
title_fullStr Automatic ladybird beetle detection using deep-learning models
title_full_unstemmed Automatic ladybird beetle detection using deep-learning models
title_short Automatic ladybird beetle detection using deep-learning models
title_sort automatic ladybird beetle detection using deep-learning models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8191954/
https://www.ncbi.nlm.nih.gov/pubmed/34111201
http://dx.doi.org/10.1371/journal.pone.0253027
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