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Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis
Objectives: Brain arteriovenous malformation (AVM) is one of the most common causes of intracranial hemorrhage in young adults, and its expeditious diagnosis on digital subtraction angiography (DSA) is essential for clinical decision-making. This paper firstly proposed a deep learning network to ext...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8193229/ https://www.ncbi.nlm.nih.gov/pubmed/34122304 http://dx.doi.org/10.3389/fneur.2021.655523 |
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author | Shi, Keke Xiao, Weiping Wu, Guoqing Xiao, Yang Lei, Yu Yu, Jinhua Gu, Yuxiang |
author_facet | Shi, Keke Xiao, Weiping Wu, Guoqing Xiao, Yang Lei, Yu Yu, Jinhua Gu, Yuxiang |
author_sort | Shi, Keke |
collection | PubMed |
description | Objectives: Brain arteriovenous malformation (AVM) is one of the most common causes of intracranial hemorrhage in young adults, and its expeditious diagnosis on digital subtraction angiography (DSA) is essential for clinical decision-making. This paper firstly proposed a deep learning network to extract vascular time-domain features from DSA videos. Then, the temporal features were combined with spatial radiomics features to build an AVM-assisted diagnosis model. Materials and method: Anteroposterior position (AP) DSA videos from 305 patients, 153 normal and 152 with AVM, were analyzed. A deep learning network based on Faster-RCNN was proposed to track important vascular features in DSA. Then the appearance order of important vascular structures was quantified as the temporal features. The structure distribution and morphological features of vessels were quantified as 1,750 radiomics features. Temporal features and radiomics features were fused in a classifier based on sparse representation and support vector machine. An AVM diagnosis and grading system that combined the temporal and spatial radiomics features of DSA was finally proposed. Accuracy (ACC), sensitivity (SENS), specificity (SPEC), and area under the receiver operating characteristic curve (AUC) were calculated to evaluate the performance of the radiomics model. Results: For cerebrovascular structure detection, the average precision (AP) was 0.922, 0.991, 0.769, 0.899, and 0.929 for internal carotid artery, Willis circle, vessels, large veins, and venous sinuses, respectively. The mean average precision (mAP) of five time phases was 0.902. For AVM diagnosis, the models based on temporal features, radiomics features, and combined features achieved AUC of 0.916, 0.918, and 0.942, respectively. In the AVM grading task, the proposed combined model also achieved AUC of 0.871 in the independent testing set. Conclusion: DSA videos provide rich temporal and spatial distribution characteristics of cerebral blood vessels. Clinicians often interpret these features based on subjective experience. This paper proposes a scheme based on deep learning and traditional machine learning, which effectively integrates the complex spatiotemporal features in DSA, and verifies the value of this scheme in the diagnosis of AVM. |
format | Online Article Text |
id | pubmed-8193229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81932292021-06-12 Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis Shi, Keke Xiao, Weiping Wu, Guoqing Xiao, Yang Lei, Yu Yu, Jinhua Gu, Yuxiang Front Neurol Neurology Objectives: Brain arteriovenous malformation (AVM) is one of the most common causes of intracranial hemorrhage in young adults, and its expeditious diagnosis on digital subtraction angiography (DSA) is essential for clinical decision-making. This paper firstly proposed a deep learning network to extract vascular time-domain features from DSA videos. Then, the temporal features were combined with spatial radiomics features to build an AVM-assisted diagnosis model. Materials and method: Anteroposterior position (AP) DSA videos from 305 patients, 153 normal and 152 with AVM, were analyzed. A deep learning network based on Faster-RCNN was proposed to track important vascular features in DSA. Then the appearance order of important vascular structures was quantified as the temporal features. The structure distribution and morphological features of vessels were quantified as 1,750 radiomics features. Temporal features and radiomics features were fused in a classifier based on sparse representation and support vector machine. An AVM diagnosis and grading system that combined the temporal and spatial radiomics features of DSA was finally proposed. Accuracy (ACC), sensitivity (SENS), specificity (SPEC), and area under the receiver operating characteristic curve (AUC) were calculated to evaluate the performance of the radiomics model. Results: For cerebrovascular structure detection, the average precision (AP) was 0.922, 0.991, 0.769, 0.899, and 0.929 for internal carotid artery, Willis circle, vessels, large veins, and venous sinuses, respectively. The mean average precision (mAP) of five time phases was 0.902. For AVM diagnosis, the models based on temporal features, radiomics features, and combined features achieved AUC of 0.916, 0.918, and 0.942, respectively. In the AVM grading task, the proposed combined model also achieved AUC of 0.871 in the independent testing set. Conclusion: DSA videos provide rich temporal and spatial distribution characteristics of cerebral blood vessels. Clinicians often interpret these features based on subjective experience. This paper proposes a scheme based on deep learning and traditional machine learning, which effectively integrates the complex spatiotemporal features in DSA, and verifies the value of this scheme in the diagnosis of AVM. Frontiers Media S.A. 2021-05-28 /pmc/articles/PMC8193229/ /pubmed/34122304 http://dx.doi.org/10.3389/fneur.2021.655523 Text en Copyright © 2021 Shi, Xiao, Wu, Xiao, Lei, Yu and Gu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neurology Shi, Keke Xiao, Weiping Wu, Guoqing Xiao, Yang Lei, Yu Yu, Jinhua Gu, Yuxiang Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title | Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title_full | Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title_fullStr | Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title_full_unstemmed | Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title_short | Temporal-Spatial Feature Extraction of DSA Video and Its Application in AVM Diagnosis |
title_sort | temporal-spatial feature extraction of dsa video and its application in avm diagnosis |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8193229/ https://www.ncbi.nlm.nih.gov/pubmed/34122304 http://dx.doi.org/10.3389/fneur.2021.655523 |
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