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The risks of using molecular biodiversity data for incidental detection of species of concern

Incidental detection of species of concern (e.g., invasive species, pathogens, threatened and endangered species) during biodiversity assessments based on high-throughput DNA sequencing holds significant risks in the absence of rigorous, fit-for-purpose data quality and reporting standards. Molecula...

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Autores principales: Darling, John A., Pochon, Xavier, Abbott, Cathryn L., Inglis, Graeme J., Zaiko, Anastasija
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8193820/
https://www.ncbi.nlm.nih.gov/pubmed/34121910
http://dx.doi.org/10.1111/ddi.13108
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author Darling, John A.
Pochon, Xavier
Abbott, Cathryn L.
Inglis, Graeme J.
Zaiko, Anastasija
author_facet Darling, John A.
Pochon, Xavier
Abbott, Cathryn L.
Inglis, Graeme J.
Zaiko, Anastasija
author_sort Darling, John A.
collection PubMed
description Incidental detection of species of concern (e.g., invasive species, pathogens, threatened and endangered species) during biodiversity assessments based on high-throughput DNA sequencing holds significant risks in the absence of rigorous, fit-for-purpose data quality and reporting standards. Molecular biodiversity data are predominantly collected for ecological studies and thus are generated to common quality assurance standards. However, the detection of certain species of concern in these data would likely elicit interest from end users working in biosecurity or other surveillance contexts (e.g., pathogen detection in health-related fields), for which more stringent quality control standards are essential to ensure that data are suitable for informing decision-making and can withstand legal or political challenges. We suggest here that data quality and reporting criteria are urgently needed to enable clear identification of those studies that may be appropriately applied to surveillance contexts. In the interim, more pointed disclaimers on uncertainties associated with the detection and identification of species of concern may be warranted in published studies. This is not only to ensure the utility of molecular biodiversity data for consumers, but also to protect data generators from uncritical and potentially ill-advised application of their science in decision-making.
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spelling pubmed-81938202021-08-13 The risks of using molecular biodiversity data for incidental detection of species of concern Darling, John A. Pochon, Xavier Abbott, Cathryn L. Inglis, Graeme J. Zaiko, Anastasija Divers Distrib Article Incidental detection of species of concern (e.g., invasive species, pathogens, threatened and endangered species) during biodiversity assessments based on high-throughput DNA sequencing holds significant risks in the absence of rigorous, fit-for-purpose data quality and reporting standards. Molecular biodiversity data are predominantly collected for ecological studies and thus are generated to common quality assurance standards. However, the detection of certain species of concern in these data would likely elicit interest from end users working in biosecurity or other surveillance contexts (e.g., pathogen detection in health-related fields), for which more stringent quality control standards are essential to ensure that data are suitable for informing decision-making and can withstand legal or political challenges. We suggest here that data quality and reporting criteria are urgently needed to enable clear identification of those studies that may be appropriately applied to surveillance contexts. In the interim, more pointed disclaimers on uncertainties associated with the detection and identification of species of concern may be warranted in published studies. This is not only to ensure the utility of molecular biodiversity data for consumers, but also to protect data generators from uncritical and potentially ill-advised application of their science in decision-making. 2020-08-13 /pmc/articles/PMC8193820/ /pubmed/34121910 http://dx.doi.org/10.1111/ddi.13108 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Darling, John A.
Pochon, Xavier
Abbott, Cathryn L.
Inglis, Graeme J.
Zaiko, Anastasija
The risks of using molecular biodiversity data for incidental detection of species of concern
title The risks of using molecular biodiversity data for incidental detection of species of concern
title_full The risks of using molecular biodiversity data for incidental detection of species of concern
title_fullStr The risks of using molecular biodiversity data for incidental detection of species of concern
title_full_unstemmed The risks of using molecular biodiversity data for incidental detection of species of concern
title_short The risks of using molecular biodiversity data for incidental detection of species of concern
title_sort risks of using molecular biodiversity data for incidental detection of species of concern
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8193820/
https://www.ncbi.nlm.nih.gov/pubmed/34121910
http://dx.doi.org/10.1111/ddi.13108
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