Cargando…

Weighing features of lung and heart regions for thoracic disease classification

BACKGROUND: Chest X-rays are the most commonly available and affordable radiological examination for screening thoracic diseases. According to the domain knowledge of screening chest X-rays, the pathological information usually lay on the lung and heart regions. However, it is costly to acquire regi...

Descripción completa

Detalles Bibliográficos
Autores principales: Fang, Jiansheng, Xu, Yanwu, Zhao, Yitian, Yan, Yuguang, Liu, Junling, Liu, Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8194196/
https://www.ncbi.nlm.nih.gov/pubmed/34112095
http://dx.doi.org/10.1186/s12880-021-00627-y
_version_ 1783706370383544320
author Fang, Jiansheng
Xu, Yanwu
Zhao, Yitian
Yan, Yuguang
Liu, Junling
Liu, Jiang
author_facet Fang, Jiansheng
Xu, Yanwu
Zhao, Yitian
Yan, Yuguang
Liu, Junling
Liu, Jiang
author_sort Fang, Jiansheng
collection PubMed
description BACKGROUND: Chest X-rays are the most commonly available and affordable radiological examination for screening thoracic diseases. According to the domain knowledge of screening chest X-rays, the pathological information usually lay on the lung and heart regions. However, it is costly to acquire region-level annotation in practice, and model training mainly relies on image-level class labels in a weakly supervised manner, which is highly challenging for computer-aided chest X-ray screening. To address this issue, some methods have been proposed recently to identify local regions containing pathological information, which is vital for thoracic disease classification. Inspired by this, we propose a novel deep learning framework to explore discriminative information from lung and heart regions. RESULT: We design a feature extractor equipped with a multi-scale attention module to learn global attention maps from global images. To exploit disease-specific cues effectively, we locate lung and heart regions containing pathological information by a well-trained pixel-wise segmentation model to generate binarization masks. By introducing element-wise logical AND operator on the learned global attention maps and the binarization masks, we obtain local attention maps in which pixels are are 1 for lung and heart region and 0 for other regions. By zeroing features of non-lung and heart regions in attention maps, we can effectively exploit their disease-specific cues in lung and heart regions. Compared to existing methods fusing global and local features, we adopt feature weighting to avoid weakening visual cues unique to lung and heart regions. Our method with pixel-wise segmentation can help overcome the deviation of locating local regions. Evaluated by the benchmark split on the publicly available chest X-ray14 dataset, the comprehensive experiments show that our method achieves superior performance compared to the state-of-the-art methods. CONCLUSION: We propose a novel deep framework for the multi-label classification of thoracic diseases in chest X-ray images. The proposed network aims to effectively exploit pathological regions containing the main cues for chest X-ray screening. Our proposed network has been used in clinic screening to assist the radiologists. Chest X-ray accounts for a significant proportion of radiological examinations. It is valuable to explore more methods for improving performance.
format Online
Article
Text
id pubmed-8194196
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-81941962021-06-15 Weighing features of lung and heart regions for thoracic disease classification Fang, Jiansheng Xu, Yanwu Zhao, Yitian Yan, Yuguang Liu, Junling Liu, Jiang BMC Med Imaging Research BACKGROUND: Chest X-rays are the most commonly available and affordable radiological examination for screening thoracic diseases. According to the domain knowledge of screening chest X-rays, the pathological information usually lay on the lung and heart regions. However, it is costly to acquire region-level annotation in practice, and model training mainly relies on image-level class labels in a weakly supervised manner, which is highly challenging for computer-aided chest X-ray screening. To address this issue, some methods have been proposed recently to identify local regions containing pathological information, which is vital for thoracic disease classification. Inspired by this, we propose a novel deep learning framework to explore discriminative information from lung and heart regions. RESULT: We design a feature extractor equipped with a multi-scale attention module to learn global attention maps from global images. To exploit disease-specific cues effectively, we locate lung and heart regions containing pathological information by a well-trained pixel-wise segmentation model to generate binarization masks. By introducing element-wise logical AND operator on the learned global attention maps and the binarization masks, we obtain local attention maps in which pixels are are 1 for lung and heart region and 0 for other regions. By zeroing features of non-lung and heart regions in attention maps, we can effectively exploit their disease-specific cues in lung and heart regions. Compared to existing methods fusing global and local features, we adopt feature weighting to avoid weakening visual cues unique to lung and heart regions. Our method with pixel-wise segmentation can help overcome the deviation of locating local regions. Evaluated by the benchmark split on the publicly available chest X-ray14 dataset, the comprehensive experiments show that our method achieves superior performance compared to the state-of-the-art methods. CONCLUSION: We propose a novel deep framework for the multi-label classification of thoracic diseases in chest X-ray images. The proposed network aims to effectively exploit pathological regions containing the main cues for chest X-ray screening. Our proposed network has been used in clinic screening to assist the radiologists. Chest X-ray accounts for a significant proportion of radiological examinations. It is valuable to explore more methods for improving performance. BioMed Central 2021-06-10 /pmc/articles/PMC8194196/ /pubmed/34112095 http://dx.doi.org/10.1186/s12880-021-00627-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Fang, Jiansheng
Xu, Yanwu
Zhao, Yitian
Yan, Yuguang
Liu, Junling
Liu, Jiang
Weighing features of lung and heart regions for thoracic disease classification
title Weighing features of lung and heart regions for thoracic disease classification
title_full Weighing features of lung and heart regions for thoracic disease classification
title_fullStr Weighing features of lung and heart regions for thoracic disease classification
title_full_unstemmed Weighing features of lung and heart regions for thoracic disease classification
title_short Weighing features of lung and heart regions for thoracic disease classification
title_sort weighing features of lung and heart regions for thoracic disease classification
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8194196/
https://www.ncbi.nlm.nih.gov/pubmed/34112095
http://dx.doi.org/10.1186/s12880-021-00627-y
work_keys_str_mv AT fangjiansheng weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification
AT xuyanwu weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification
AT zhaoyitian weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification
AT yanyuguang weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification
AT liujunling weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification
AT liujiang weighingfeaturesoflungandheartregionsforthoracicdiseaseclassification