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Privacy-protecting, reliable response data discovery using COVID-19 patient observations
OBJECTIVE: To utilize, in an individual and institutional privacy-preserving manner, electronic health record (EHR) data from 202 hospitals by analyzing answers to COVID-19-related questions and posting these answers online. MATERIALS AND METHODS: We developed a distributed, federated network of 12...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8194878/ https://www.ncbi.nlm.nih.gov/pubmed/34051088 http://dx.doi.org/10.1093/jamia/ocab054 |
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author | Kim, Jihoon Neumann, Larissa Paul, Paulina Day, Michele E Aratow, Michael Bell, Douglas S Doctor, Jason N Hinske, Ludwig C Jiang, Xiaoqian Kim, Katherine K Matheny, Michael E Meeker, Daniella Pletcher, Mark J Schilling, Lisa M SooHoo, Spencer Xu, Hua Zheng, Kai Ohno-Machado, Lucila |
author_facet | Kim, Jihoon Neumann, Larissa Paul, Paulina Day, Michele E Aratow, Michael Bell, Douglas S Doctor, Jason N Hinske, Ludwig C Jiang, Xiaoqian Kim, Katherine K Matheny, Michael E Meeker, Daniella Pletcher, Mark J Schilling, Lisa M SooHoo, Spencer Xu, Hua Zheng, Kai Ohno-Machado, Lucila |
author_sort | Kim, Jihoon |
collection | PubMed |
description | OBJECTIVE: To utilize, in an individual and institutional privacy-preserving manner, electronic health record (EHR) data from 202 hospitals by analyzing answers to COVID-19-related questions and posting these answers online. MATERIALS AND METHODS: We developed a distributed, federated network of 12 health systems that harmonized their EHRs and submitted aggregate answers to consortia questions posted at https://www.covid19questions.org. Our consortium developed processes and implemented distributed algorithms to produce answers to a variety of questions. We were able to generate counts, descriptive statistics, and build a multivariate, iterative regression model without centralizing individual-level data. RESULTS: Our public website contains answers to various clinical questions, a web form for users to ask questions in natural language, and a list of items that are currently pending responses. The results show, for example, that patients who were taking angiotensin-converting enzyme inhibitors and angiotensin II receptor blockers, within the year before admission, had lower unadjusted in-hospital mortality rates. We also showed that, when adjusted for, age, sex, and ethnicity were not significantly associated with mortality. We demonstrated that it is possible to answer questions about COVID-19 using EHR data from systems that have different policies and must follow various regulations, without moving data out of their health systems. DISCUSSION AND CONCLUSIONS: We present an alternative or a complement to centralized COVID-19 registries of EHR data. We can use multivariate distributed logistic regression on observations recorded in the process of care to generate results without transferring individual-level data outside the health systems. |
format | Online Article Text |
id | pubmed-8194878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-81948782021-06-15 Privacy-protecting, reliable response data discovery using COVID-19 patient observations Kim, Jihoon Neumann, Larissa Paul, Paulina Day, Michele E Aratow, Michael Bell, Douglas S Doctor, Jason N Hinske, Ludwig C Jiang, Xiaoqian Kim, Katherine K Matheny, Michael E Meeker, Daniella Pletcher, Mark J Schilling, Lisa M SooHoo, Spencer Xu, Hua Zheng, Kai Ohno-Machado, Lucila J Am Med Inform Assoc Research and Applications OBJECTIVE: To utilize, in an individual and institutional privacy-preserving manner, electronic health record (EHR) data from 202 hospitals by analyzing answers to COVID-19-related questions and posting these answers online. MATERIALS AND METHODS: We developed a distributed, federated network of 12 health systems that harmonized their EHRs and submitted aggregate answers to consortia questions posted at https://www.covid19questions.org. Our consortium developed processes and implemented distributed algorithms to produce answers to a variety of questions. We were able to generate counts, descriptive statistics, and build a multivariate, iterative regression model without centralizing individual-level data. RESULTS: Our public website contains answers to various clinical questions, a web form for users to ask questions in natural language, and a list of items that are currently pending responses. The results show, for example, that patients who were taking angiotensin-converting enzyme inhibitors and angiotensin II receptor blockers, within the year before admission, had lower unadjusted in-hospital mortality rates. We also showed that, when adjusted for, age, sex, and ethnicity were not significantly associated with mortality. We demonstrated that it is possible to answer questions about COVID-19 using EHR data from systems that have different policies and must follow various regulations, without moving data out of their health systems. DISCUSSION AND CONCLUSIONS: We present an alternative or a complement to centralized COVID-19 registries of EHR data. We can use multivariate distributed logistic regression on observations recorded in the process of care to generate results without transferring individual-level data outside the health systems. Oxford University Press 2021-05-29 /pmc/articles/PMC8194878/ /pubmed/34051088 http://dx.doi.org/10.1093/jamia/ocab054 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research and Applications Kim, Jihoon Neumann, Larissa Paul, Paulina Day, Michele E Aratow, Michael Bell, Douglas S Doctor, Jason N Hinske, Ludwig C Jiang, Xiaoqian Kim, Katherine K Matheny, Michael E Meeker, Daniella Pletcher, Mark J Schilling, Lisa M SooHoo, Spencer Xu, Hua Zheng, Kai Ohno-Machado, Lucila Privacy-protecting, reliable response data discovery using COVID-19 patient observations |
title | Privacy-protecting, reliable response data discovery using COVID-19 patient
observations |
title_full | Privacy-protecting, reliable response data discovery using COVID-19 patient
observations |
title_fullStr | Privacy-protecting, reliable response data discovery using COVID-19 patient
observations |
title_full_unstemmed | Privacy-protecting, reliable response data discovery using COVID-19 patient
observations |
title_short | Privacy-protecting, reliable response data discovery using COVID-19 patient
observations |
title_sort | privacy-protecting, reliable response data discovery using covid-19 patient
observations |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8194878/ https://www.ncbi.nlm.nih.gov/pubmed/34051088 http://dx.doi.org/10.1093/jamia/ocab054 |
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