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Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma

BACKGROUND: Glucose transporter 1 (GLUT1) is encoded by the solute carrier family 2A1 (SLC2A1) gene and is one of the glucose transporters with the greatest affinity for glucose. Abnormal expression of GLUT1 is associated with a variety of cancers. However, the biological role of GLUT1 in esophageal...

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Autores principales: Liu, Xu-Sheng, Gao, Yan, Wu, Li-Bing, Wan, Hua-Bing, Yan, Peng, Jin, Yang, Guo, Shi-Bo, Wang, Ya-Lan, Chen, Xue-Qin, Zhou, Lu-Meng, Yang, Jian-Wei, Kui, Xue-Yan, Liu, Xiao-Yu, Pei, Zhi-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8195627/
https://www.ncbi.nlm.nih.gov/pubmed/34123828
http://dx.doi.org/10.3389/fonc.2021.665388
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author Liu, Xu-Sheng
Gao, Yan
Wu, Li-Bing
Wan, Hua-Bing
Yan, Peng
Jin, Yang
Guo, Shi-Bo
Wang, Ya-Lan
Chen, Xue-Qin
Zhou, Lu-Meng
Yang, Jian-Wei
Kui, Xue-Yan
Liu, Xiao-Yu
Pei, Zhi-Jun
author_facet Liu, Xu-Sheng
Gao, Yan
Wu, Li-Bing
Wan, Hua-Bing
Yan, Peng
Jin, Yang
Guo, Shi-Bo
Wang, Ya-Lan
Chen, Xue-Qin
Zhou, Lu-Meng
Yang, Jian-Wei
Kui, Xue-Yan
Liu, Xiao-Yu
Pei, Zhi-Jun
author_sort Liu, Xu-Sheng
collection PubMed
description BACKGROUND: Glucose transporter 1 (GLUT1) is encoded by the solute carrier family 2A1 (SLC2A1) gene and is one of the glucose transporters with the greatest affinity for glucose. Abnormal expression of GLUT1 is associated with a variety of cancers. However, the biological role of GLUT1 in esophageal carcinoma (ESCA) remains to be determined. METHODS: We analyzed the expression of GLUT1 in pan-cancer and ESCA as well as clinicopathological analysis through multiple databases. Use R and STRING to perform GO/KEGG function enrichment and PPI analysis for GLUT1 co-expression. TIMER and CIBERSORT were used to analyze the relationship between GLUT1 expression and immune infiltration in ESCA. The TCGA ESCA cohort was used to analyze the relationship between GLUT1 expression and m6A modification in ESCA, and to construct a regulatory network in line with the ceRNA hypothesis. RESULTS: GLUT1 is highly expressed in a variety of tumors including ESCA, and is closely related to histological types and histological grade. GO/KEGG functional enrichment analysis revealed that GLUT1 is closely related to structural constituent of cytoskeleton, intermediate filament binding, cell-cell adheres junction, epidermis development, and P53 signaling pathway. PPI shows that GLUT1 is closely related to TP53, GIPC1 and INS, and these three proteins all play an important role in tumor proliferation. CIBERSORT analysis showed that GLUT1 expression is related to the infiltration of multiple immune cells. When GLUT1 is highly expressed, the number of memory B cells decreases. ESCA cohort analysis found that GLUT1 expression was related to 7 m6A modifier genes. Six possible crRNA networks in ESCA were constructed by correlation analysis, and all these ceRNA networks contained GLUT1. CONCLUSION: GLUT1 can be used as a biomarker for the diagnosis and treatment of ESCA, and is related to tumor immune infiltration, m6A modification and ceRNA network.
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spelling pubmed-81956272021-06-12 Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma Liu, Xu-Sheng Gao, Yan Wu, Li-Bing Wan, Hua-Bing Yan, Peng Jin, Yang Guo, Shi-Bo Wang, Ya-Lan Chen, Xue-Qin Zhou, Lu-Meng Yang, Jian-Wei Kui, Xue-Yan Liu, Xiao-Yu Pei, Zhi-Jun Front Oncol Oncology BACKGROUND: Glucose transporter 1 (GLUT1) is encoded by the solute carrier family 2A1 (SLC2A1) gene and is one of the glucose transporters with the greatest affinity for glucose. Abnormal expression of GLUT1 is associated with a variety of cancers. However, the biological role of GLUT1 in esophageal carcinoma (ESCA) remains to be determined. METHODS: We analyzed the expression of GLUT1 in pan-cancer and ESCA as well as clinicopathological analysis through multiple databases. Use R and STRING to perform GO/KEGG function enrichment and PPI analysis for GLUT1 co-expression. TIMER and CIBERSORT were used to analyze the relationship between GLUT1 expression and immune infiltration in ESCA. The TCGA ESCA cohort was used to analyze the relationship between GLUT1 expression and m6A modification in ESCA, and to construct a regulatory network in line with the ceRNA hypothesis. RESULTS: GLUT1 is highly expressed in a variety of tumors including ESCA, and is closely related to histological types and histological grade. GO/KEGG functional enrichment analysis revealed that GLUT1 is closely related to structural constituent of cytoskeleton, intermediate filament binding, cell-cell adheres junction, epidermis development, and P53 signaling pathway. PPI shows that GLUT1 is closely related to TP53, GIPC1 and INS, and these three proteins all play an important role in tumor proliferation. CIBERSORT analysis showed that GLUT1 expression is related to the infiltration of multiple immune cells. When GLUT1 is highly expressed, the number of memory B cells decreases. ESCA cohort analysis found that GLUT1 expression was related to 7 m6A modifier genes. Six possible crRNA networks in ESCA were constructed by correlation analysis, and all these ceRNA networks contained GLUT1. CONCLUSION: GLUT1 can be used as a biomarker for the diagnosis and treatment of ESCA, and is related to tumor immune infiltration, m6A modification and ceRNA network. Frontiers Media S.A. 2021-05-28 /pmc/articles/PMC8195627/ /pubmed/34123828 http://dx.doi.org/10.3389/fonc.2021.665388 Text en Copyright © 2021 Liu, Gao, Wu, Wan, Yan, Jin, Guo, Wang, Chen, Zhou, Yang, Kui, Liu and Pei https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Liu, Xu-Sheng
Gao, Yan
Wu, Li-Bing
Wan, Hua-Bing
Yan, Peng
Jin, Yang
Guo, Shi-Bo
Wang, Ya-Lan
Chen, Xue-Qin
Zhou, Lu-Meng
Yang, Jian-Wei
Kui, Xue-Yan
Liu, Xiao-Yu
Pei, Zhi-Jun
Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title_full Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title_fullStr Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title_full_unstemmed Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title_short Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
title_sort comprehensive analysis of glut1 immune infiltrates and cerna network in human esophageal carcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8195627/
https://www.ncbi.nlm.nih.gov/pubmed/34123828
http://dx.doi.org/10.3389/fonc.2021.665388
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