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The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations

With the growing evidence on the variable human susceptibility against COVID-19, it is evident that some genetic loci modulate the severity of the infection. Recent studies have identified several loci associated with greater severity. More recently, a study has identified a 50 kb genomic segment in...

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Autores principales: Singh, Prajjval Pratap, Srivastava, Anshika, Sultana, Gazi Nurun Nahar, Khanam, Nargis, Pathak, Abhishek, Suravajhala, Prashanth, Singh, Royana, Shrivastava, Pankaj, van Driem, George, Thangaraj, Kumarasamy, Chaubey, Gyaneshwer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8196069/
https://www.ncbi.nlm.nih.gov/pubmed/34117310
http://dx.doi.org/10.1038/s41598-021-91711-4
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author Singh, Prajjval Pratap
Srivastava, Anshika
Sultana, Gazi Nurun Nahar
Khanam, Nargis
Pathak, Abhishek
Suravajhala, Prashanth
Singh, Royana
Shrivastava, Pankaj
van Driem, George
Thangaraj, Kumarasamy
Chaubey, Gyaneshwer
author_facet Singh, Prajjval Pratap
Srivastava, Anshika
Sultana, Gazi Nurun Nahar
Khanam, Nargis
Pathak, Abhishek
Suravajhala, Prashanth
Singh, Royana
Shrivastava, Pankaj
van Driem, George
Thangaraj, Kumarasamy
Chaubey, Gyaneshwer
author_sort Singh, Prajjval Pratap
collection PubMed
description With the growing evidence on the variable human susceptibility against COVID-19, it is evident that some genetic loci modulate the severity of the infection. Recent studies have identified several loci associated with greater severity. More recently, a study has identified a 50 kb genomic segment introgressed from Neanderthal adding a risk for COVID-19, and this genomic segment is present among 16% and 50% people of European and South Asian descent, respectively. Our studies on ACE2 identified a haplotype present among 20% and 60% of European and South Asian populations, respectively, which appears to be responsible for the low case fatality rate among South Asian populations. This result was also consistent with the real-time infection rate and case fatality rate among various states of India. We readdressed this issue using both of the contrasting datasets and compared them with the real-time infection rates and case fatality rate in India. We found that the polymorphism present in the 50 kb introgressed genomic segment (rs10490770) did not show any significant correlation with the infection and case fatality rate in India.
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spelling pubmed-81960692021-06-15 The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations Singh, Prajjval Pratap Srivastava, Anshika Sultana, Gazi Nurun Nahar Khanam, Nargis Pathak, Abhishek Suravajhala, Prashanth Singh, Royana Shrivastava, Pankaj van Driem, George Thangaraj, Kumarasamy Chaubey, Gyaneshwer Sci Rep Article With the growing evidence on the variable human susceptibility against COVID-19, it is evident that some genetic loci modulate the severity of the infection. Recent studies have identified several loci associated with greater severity. More recently, a study has identified a 50 kb genomic segment introgressed from Neanderthal adding a risk for COVID-19, and this genomic segment is present among 16% and 50% people of European and South Asian descent, respectively. Our studies on ACE2 identified a haplotype present among 20% and 60% of European and South Asian populations, respectively, which appears to be responsible for the low case fatality rate among South Asian populations. This result was also consistent with the real-time infection rate and case fatality rate among various states of India. We readdressed this issue using both of the contrasting datasets and compared them with the real-time infection rates and case fatality rate in India. We found that the polymorphism present in the 50 kb introgressed genomic segment (rs10490770) did not show any significant correlation with the infection and case fatality rate in India. Nature Publishing Group UK 2021-06-11 /pmc/articles/PMC8196069/ /pubmed/34117310 http://dx.doi.org/10.1038/s41598-021-91711-4 Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Singh, Prajjval Pratap
Srivastava, Anshika
Sultana, Gazi Nurun Nahar
Khanam, Nargis
Pathak, Abhishek
Suravajhala, Prashanth
Singh, Royana
Shrivastava, Pankaj
van Driem, George
Thangaraj, Kumarasamy
Chaubey, Gyaneshwer
The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title_full The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title_fullStr The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title_full_unstemmed The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title_short The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations
title_sort major genetic risk factor for severe covid-19 does not show any association among south asian populations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8196069/
https://www.ncbi.nlm.nih.gov/pubmed/34117310
http://dx.doi.org/10.1038/s41598-021-91711-4
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