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Recurrent neural network-based acute concussion classifier using raw resting state EEG data
Concussion is a global health concern. Despite its high prevalence, a sound understanding of the mechanisms underlying this type of diffuse brain injury remains elusive. It is, however, well established that concussions cause significant functional deficits; that children and youths are disproportio...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8196170/ https://www.ncbi.nlm.nih.gov/pubmed/34117309 http://dx.doi.org/10.1038/s41598-021-91614-4 |
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author | Thanjavur, Karun Babul, Arif Foran, Brandon Bielecki, Maya Gilchrist, Adam Hristopulos, Dionissios T. Brucar, Leyla R. Virji-Babul, Naznin |
author_facet | Thanjavur, Karun Babul, Arif Foran, Brandon Bielecki, Maya Gilchrist, Adam Hristopulos, Dionissios T. Brucar, Leyla R. Virji-Babul, Naznin |
author_sort | Thanjavur, Karun |
collection | PubMed |
description | Concussion is a global health concern. Despite its high prevalence, a sound understanding of the mechanisms underlying this type of diffuse brain injury remains elusive. It is, however, well established that concussions cause significant functional deficits; that children and youths are disproportionately affected and have longer recovery time than adults; and that individuals suffering from a concussion are more prone to experience additional concussions, with each successive injury increasing the risk of long term neurological and mental health complications. Currently, the most significant challenge in concussion management is the lack of objective, clinically- accepted, brain-based approaches for determining whether an athlete has suffered a concussion. Here, we report on our efforts to address this challenge. Specifically, we introduce a deep learning long short-term memory (LSTM)-based recurrent neural network that is able to distinguish between non-concussed and acute post-concussed adolescent athletes using only short (i.e. 90 s long) samples of resting state EEG data as input. The athletes were neither required to perform a specific task nor expected to respond to a stimulus during data collection. The acquired EEG data were neither filtered, cleaned of artefacts, nor subjected to explicit feature extraction. The LSTM network was trained and validated using data from 27 male, adolescent athletes with sports related concussion, benchmarked against 35 non-concussed adolescent athletes. During rigorous testing, the classifier consistently identified concussions with an accuracy of > 90% and achieved an ensemble median Area Under the Receiver Operating Characteristic Curve (ROC/AUC) equal to 0.971. This is the first instance of a high-performing classifier that relies only on easy-to-acquire resting state, raw EEG data. Our concussion classifier represents a promising first step towards the development of an easy-to-use, objective, brain-based, automatic classification of concussion at an individual level. |
format | Online Article Text |
id | pubmed-8196170 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81961702021-06-15 Recurrent neural network-based acute concussion classifier using raw resting state EEG data Thanjavur, Karun Babul, Arif Foran, Brandon Bielecki, Maya Gilchrist, Adam Hristopulos, Dionissios T. Brucar, Leyla R. Virji-Babul, Naznin Sci Rep Article Concussion is a global health concern. Despite its high prevalence, a sound understanding of the mechanisms underlying this type of diffuse brain injury remains elusive. It is, however, well established that concussions cause significant functional deficits; that children and youths are disproportionately affected and have longer recovery time than adults; and that individuals suffering from a concussion are more prone to experience additional concussions, with each successive injury increasing the risk of long term neurological and mental health complications. Currently, the most significant challenge in concussion management is the lack of objective, clinically- accepted, brain-based approaches for determining whether an athlete has suffered a concussion. Here, we report on our efforts to address this challenge. Specifically, we introduce a deep learning long short-term memory (LSTM)-based recurrent neural network that is able to distinguish between non-concussed and acute post-concussed adolescent athletes using only short (i.e. 90 s long) samples of resting state EEG data as input. The athletes were neither required to perform a specific task nor expected to respond to a stimulus during data collection. The acquired EEG data were neither filtered, cleaned of artefacts, nor subjected to explicit feature extraction. The LSTM network was trained and validated using data from 27 male, adolescent athletes with sports related concussion, benchmarked against 35 non-concussed adolescent athletes. During rigorous testing, the classifier consistently identified concussions with an accuracy of > 90% and achieved an ensemble median Area Under the Receiver Operating Characteristic Curve (ROC/AUC) equal to 0.971. This is the first instance of a high-performing classifier that relies only on easy-to-acquire resting state, raw EEG data. Our concussion classifier represents a promising first step towards the development of an easy-to-use, objective, brain-based, automatic classification of concussion at an individual level. Nature Publishing Group UK 2021-06-11 /pmc/articles/PMC8196170/ /pubmed/34117309 http://dx.doi.org/10.1038/s41598-021-91614-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Thanjavur, Karun Babul, Arif Foran, Brandon Bielecki, Maya Gilchrist, Adam Hristopulos, Dionissios T. Brucar, Leyla R. Virji-Babul, Naznin Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title | Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title_full | Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title_fullStr | Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title_full_unstemmed | Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title_short | Recurrent neural network-based acute concussion classifier using raw resting state EEG data |
title_sort | recurrent neural network-based acute concussion classifier using raw resting state eeg data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8196170/ https://www.ncbi.nlm.nih.gov/pubmed/34117309 http://dx.doi.org/10.1038/s41598-021-91614-4 |
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