Cargando…

Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis

SIMPLE SUMMARY: Glioma prognosis and treatment are based on histopathological characteristics and molecular profile. Following the World Health Organization (WHO) guidelines (2016), the most important molecular diagnostic markers include IDH1/2-genotype and 1p/19q codeletion status, although more re...

Descripción completa

Detalles Bibliográficos
Autores principales: van Kempen, Evi J., Post, Max, Mannil, Manoj, Kusters, Benno, ter Laan, Mark, Meijer, Frederick J. A., Henssen, Dylan J. H. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8198025/
https://www.ncbi.nlm.nih.gov/pubmed/34073309
http://dx.doi.org/10.3390/cancers13112606
_version_ 1783707039333089280
author van Kempen, Evi J.
Post, Max
Mannil, Manoj
Kusters, Benno
ter Laan, Mark
Meijer, Frederick J. A.
Henssen, Dylan J. H. A.
author_facet van Kempen, Evi J.
Post, Max
Mannil, Manoj
Kusters, Benno
ter Laan, Mark
Meijer, Frederick J. A.
Henssen, Dylan J. H. A.
author_sort van Kempen, Evi J.
collection PubMed
description SIMPLE SUMMARY: Glioma prognosis and treatment are based on histopathological characteristics and molecular profile. Following the World Health Organization (WHO) guidelines (2016), the most important molecular diagnostic markers include IDH1/2-genotype and 1p/19q codeletion status, although more recent publications also include ARTX genotype and TERT- and MGMT promoter methylation. Machine learning algorithms (MLAs), however, were described to successfully determine these molecular characteristics non-invasively by using magnetic resonance imaging (MRI) data. The aim of this review and meta-analysis was to define the diagnostic accuracy of MLAs with regard to these different molecular markers. We found high accuracies of MLAs to predict each individual molecular marker, with IDH1/2-genotype being the most investigated and the most accurate. Radiogenomics could therefore be a promising tool for discriminating genetically determined gliomas in a non-invasive fashion. Although encouraging results are presented here, large-scale, prospective trials with external validation groups are warranted. ABSTRACT: Treatment planning and prognosis in glioma treatment are based on the classification into low- and high-grade oligodendroglioma or astrocytoma, which is mainly based on molecular characteristics (IDH1/2- and 1p/19q codeletion status). It would be of great value if this classification could be made reliably before surgery, without biopsy. Machine learning algorithms (MLAs) could play a role in achieving this by enabling glioma characterization on magnetic resonance imaging (MRI) data without invasive tissue sampling. The aim of this study is to provide a performance evaluation and meta-analysis of various MLAs for glioma characterization. Systematic literature search and meta-analysis were performed on the aggregated data, after which subgroup analyses for several target conditions were conducted. This study is registered with PROSPERO, CRD42020191033. We identified 724 studies; 60 and 17 studies were eligible to be included in the systematic review and meta-analysis, respectively. Meta-analysis showed excellent accuracy for all subgroups, with the classification of 1p/19q codeletion status scoring significantly poorer than other subgroups (AUC: 0.748, p = 0.132). There was considerable heterogeneity among some of the included studies. Although promising results were found with regard to the ability of MLA-tools to be used for the non-invasive classification of gliomas, large-scale, prospective trials with external validation are warranted in the future.
format Online
Article
Text
id pubmed-8198025
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-81980252021-06-14 Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis van Kempen, Evi J. Post, Max Mannil, Manoj Kusters, Benno ter Laan, Mark Meijer, Frederick J. A. Henssen, Dylan J. H. A. Cancers (Basel) Systematic Review SIMPLE SUMMARY: Glioma prognosis and treatment are based on histopathological characteristics and molecular profile. Following the World Health Organization (WHO) guidelines (2016), the most important molecular diagnostic markers include IDH1/2-genotype and 1p/19q codeletion status, although more recent publications also include ARTX genotype and TERT- and MGMT promoter methylation. Machine learning algorithms (MLAs), however, were described to successfully determine these molecular characteristics non-invasively by using magnetic resonance imaging (MRI) data. The aim of this review and meta-analysis was to define the diagnostic accuracy of MLAs with regard to these different molecular markers. We found high accuracies of MLAs to predict each individual molecular marker, with IDH1/2-genotype being the most investigated and the most accurate. Radiogenomics could therefore be a promising tool for discriminating genetically determined gliomas in a non-invasive fashion. Although encouraging results are presented here, large-scale, prospective trials with external validation groups are warranted. ABSTRACT: Treatment planning and prognosis in glioma treatment are based on the classification into low- and high-grade oligodendroglioma or astrocytoma, which is mainly based on molecular characteristics (IDH1/2- and 1p/19q codeletion status). It would be of great value if this classification could be made reliably before surgery, without biopsy. Machine learning algorithms (MLAs) could play a role in achieving this by enabling glioma characterization on magnetic resonance imaging (MRI) data without invasive tissue sampling. The aim of this study is to provide a performance evaluation and meta-analysis of various MLAs for glioma characterization. Systematic literature search and meta-analysis were performed on the aggregated data, after which subgroup analyses for several target conditions were conducted. This study is registered with PROSPERO, CRD42020191033. We identified 724 studies; 60 and 17 studies were eligible to be included in the systematic review and meta-analysis, respectively. Meta-analysis showed excellent accuracy for all subgroups, with the classification of 1p/19q codeletion status scoring significantly poorer than other subgroups (AUC: 0.748, p = 0.132). There was considerable heterogeneity among some of the included studies. Although promising results were found with regard to the ability of MLA-tools to be used for the non-invasive classification of gliomas, large-scale, prospective trials with external validation are warranted in the future. MDPI 2021-05-26 /pmc/articles/PMC8198025/ /pubmed/34073309 http://dx.doi.org/10.3390/cancers13112606 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Systematic Review
van Kempen, Evi J.
Post, Max
Mannil, Manoj
Kusters, Benno
ter Laan, Mark
Meijer, Frederick J. A.
Henssen, Dylan J. H. A.
Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title_full Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title_fullStr Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title_full_unstemmed Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title_short Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis
title_sort accuracy of machine learning algorithms for the classification of molecular features of gliomas on mri: a systematic literature review and meta-analysis
topic Systematic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8198025/
https://www.ncbi.nlm.nih.gov/pubmed/34073309
http://dx.doi.org/10.3390/cancers13112606
work_keys_str_mv AT vankempenevij accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT postmax accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT mannilmanoj accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT kustersbenno accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT terlaanmark accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT meijerfrederickja accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis
AT henssendylanjha accuracyofmachinelearningalgorithmsfortheclassificationofmolecularfeaturesofgliomasonmriasystematicliteraturereviewandmetaanalysis