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Deep Learning Insights into Lanthanides Complexation Chemistry

Modern structure–property models are widely used in chemistry; however, in many cases, they are still a kind of a “black box” where there is no clear path from molecule structure to target property. Here we present an example of deep learning usage not only to build a model but also to determine key...

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Autores principales: Mitrofanov, Artem A., Matveev, Petr I., Yakubova, Kristina V., Korotcov, Alexandru, Sattarov, Boris, Tkachenko, Valery, Kalmykov, Stepan N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8198800/
https://www.ncbi.nlm.nih.gov/pubmed/34072262
http://dx.doi.org/10.3390/molecules26113237
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author Mitrofanov, Artem A.
Matveev, Petr I.
Yakubova, Kristina V.
Korotcov, Alexandru
Sattarov, Boris
Tkachenko, Valery
Kalmykov, Stepan N.
author_facet Mitrofanov, Artem A.
Matveev, Petr I.
Yakubova, Kristina V.
Korotcov, Alexandru
Sattarov, Boris
Tkachenko, Valery
Kalmykov, Stepan N.
author_sort Mitrofanov, Artem A.
collection PubMed
description Modern structure–property models are widely used in chemistry; however, in many cases, they are still a kind of a “black box” where there is no clear path from molecule structure to target property. Here we present an example of deep learning usage not only to build a model but also to determine key structural fragments of ligands influencing metal complexation. We have a series of chemically similar lanthanide ions, and we have collected data on complexes’ stability, built models, predicting stability constants and decoded the models to obtain key fragments responsible for complexation efficiency. The results are in good correlation with the experimental ones, as well as modern theories of complexation. It was shown that the main influence on the constants had a mutual location of the binding centers.
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spelling pubmed-81988002021-06-14 Deep Learning Insights into Lanthanides Complexation Chemistry Mitrofanov, Artem A. Matveev, Petr I. Yakubova, Kristina V. Korotcov, Alexandru Sattarov, Boris Tkachenko, Valery Kalmykov, Stepan N. Molecules Communication Modern structure–property models are widely used in chemistry; however, in many cases, they are still a kind of a “black box” where there is no clear path from molecule structure to target property. Here we present an example of deep learning usage not only to build a model but also to determine key structural fragments of ligands influencing metal complexation. We have a series of chemically similar lanthanide ions, and we have collected data on complexes’ stability, built models, predicting stability constants and decoded the models to obtain key fragments responsible for complexation efficiency. The results are in good correlation with the experimental ones, as well as modern theories of complexation. It was shown that the main influence on the constants had a mutual location of the binding centers. MDPI 2021-05-27 /pmc/articles/PMC8198800/ /pubmed/34072262 http://dx.doi.org/10.3390/molecules26113237 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Mitrofanov, Artem A.
Matveev, Petr I.
Yakubova, Kristina V.
Korotcov, Alexandru
Sattarov, Boris
Tkachenko, Valery
Kalmykov, Stepan N.
Deep Learning Insights into Lanthanides Complexation Chemistry
title Deep Learning Insights into Lanthanides Complexation Chemistry
title_full Deep Learning Insights into Lanthanides Complexation Chemistry
title_fullStr Deep Learning Insights into Lanthanides Complexation Chemistry
title_full_unstemmed Deep Learning Insights into Lanthanides Complexation Chemistry
title_short Deep Learning Insights into Lanthanides Complexation Chemistry
title_sort deep learning insights into lanthanides complexation chemistry
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8198800/
https://www.ncbi.nlm.nih.gov/pubmed/34072262
http://dx.doi.org/10.3390/molecules26113237
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