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The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China
Primary successional ecosystems and the related soil development are often N limited. To date, N(2)-fixing communities during primary succession in alpine ecosystems have remained underexplored. In this study, we applied quantitative PCR (qPCR) quantitation and targeted amplicon sequencing of nifH i...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8200853/ https://www.ncbi.nlm.nih.gov/pubmed/34135879 http://dx.doi.org/10.3389/fmicb.2021.672656 |
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author | Wang, Yingyan Chen, Yulan Xue, Qinyu Xiang, Quanju Zhao, Ke Yu, Xiumei Chen, Qiang Ma, Menggen Jiang, Hao Zhang, Xiaoping Penttinen, Petri Gu, Yunfu |
author_facet | Wang, Yingyan Chen, Yulan Xue, Qinyu Xiang, Quanju Zhao, Ke Yu, Xiumei Chen, Qiang Ma, Menggen Jiang, Hao Zhang, Xiaoping Penttinen, Petri Gu, Yunfu |
author_sort | Wang, Yingyan |
collection | PubMed |
description | Primary successional ecosystems and the related soil development are often N limited. To date, N(2)-fixing communities during primary succession in alpine ecosystems have remained underexplored. In this study, we applied quantitative PCR (qPCR) quantitation and targeted amplicon sequencing of nifH in the Hailuogou Glacier foreland to investigate the succession of N(2)-fixing communities in five sites along a 62-year chronosequence. The abundance of the nifH gene increased along the primary succession in the chronosequence and correlated positively with pH, acetylene reduction activity, and water, organic C, total and available N, and available P contents. The increases in alpha diversity along the chronosequence may have been partly due to less competition for resources. In contrast to the clear separation based on soil properties, the changes in the diazotrophic community composition lacked a clear trend and were associated mostly with changes in soil available K and organic C contents. The changes among differentially abundant genera were possibly due to the changes in plant coverage and species composition. The whole primary succession of the diazotrophic communities was consistent with stochastic community assembly, which is indicative of low competitive pressure. |
format | Online Article Text |
id | pubmed-8200853 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82008532021-06-15 The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China Wang, Yingyan Chen, Yulan Xue, Qinyu Xiang, Quanju Zhao, Ke Yu, Xiumei Chen, Qiang Ma, Menggen Jiang, Hao Zhang, Xiaoping Penttinen, Petri Gu, Yunfu Front Microbiol Microbiology Primary successional ecosystems and the related soil development are often N limited. To date, N(2)-fixing communities during primary succession in alpine ecosystems have remained underexplored. In this study, we applied quantitative PCR (qPCR) quantitation and targeted amplicon sequencing of nifH in the Hailuogou Glacier foreland to investigate the succession of N(2)-fixing communities in five sites along a 62-year chronosequence. The abundance of the nifH gene increased along the primary succession in the chronosequence and correlated positively with pH, acetylene reduction activity, and water, organic C, total and available N, and available P contents. The increases in alpha diversity along the chronosequence may have been partly due to less competition for resources. In contrast to the clear separation based on soil properties, the changes in the diazotrophic community composition lacked a clear trend and were associated mostly with changes in soil available K and organic C contents. The changes among differentially abundant genera were possibly due to the changes in plant coverage and species composition. The whole primary succession of the diazotrophic communities was consistent with stochastic community assembly, which is indicative of low competitive pressure. Frontiers Media S.A. 2021-05-31 /pmc/articles/PMC8200853/ /pubmed/34135879 http://dx.doi.org/10.3389/fmicb.2021.672656 Text en Copyright © 2021 Wang, Chen, Xue, Xiang, Zhao, Yu, Chen, Ma, Jiang, Zhang, Penttinen and Gu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Wang, Yingyan Chen, Yulan Xue, Qinyu Xiang, Quanju Zhao, Ke Yu, Xiumei Chen, Qiang Ma, Menggen Jiang, Hao Zhang, Xiaoping Penttinen, Petri Gu, Yunfu The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title | The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title_full | The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title_fullStr | The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title_full_unstemmed | The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title_short | The Abundance of the nifH Gene Became Higher and the nifH-Containing Diazotrophic Bacterial Communities Changed During Primary Succession in the Hailuogou Glacier Chronosequence, China |
title_sort | abundance of the nifh gene became higher and the nifh-containing diazotrophic bacterial communities changed during primary succession in the hailuogou glacier chronosequence, china |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8200853/ https://www.ncbi.nlm.nih.gov/pubmed/34135879 http://dx.doi.org/10.3389/fmicb.2021.672656 |
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