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DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments

A DFT study of the (1)H NMR chemical shifts, δ((1)H), of geometric isomers of 18:3 conjugated linolenic acids (CLnAs), hexadecatrienyl pheromones, and model triene-containing compounds is presented, using standard functionals (B3LYP and PBE0) as well as corrections for dispersion interactions (B3LYP...

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Autores principales: Venianakis, Themistoklis, Oikonomaki, Christina, Siskos, Michael G., Primikyri, Alexandra, Gerothanassis, Ioannis P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201138/
https://www.ncbi.nlm.nih.gov/pubmed/34200468
http://dx.doi.org/10.3390/molecules26113477
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author Venianakis, Themistoklis
Oikonomaki, Christina
Siskos, Michael G.
Primikyri, Alexandra
Gerothanassis, Ioannis P.
author_facet Venianakis, Themistoklis
Oikonomaki, Christina
Siskos, Michael G.
Primikyri, Alexandra
Gerothanassis, Ioannis P.
author_sort Venianakis, Themistoklis
collection PubMed
description A DFT study of the (1)H NMR chemical shifts, δ((1)H), of geometric isomers of 18:3 conjugated linolenic acids (CLnAs), hexadecatrienyl pheromones, and model triene-containing compounds is presented, using standard functionals (B3LYP and PBE0) as well as corrections for dispersion interactions (B3LYP-D3, APFD, M06–2X and ωB97XD). The results are compared with literature experimental δ((1)H) data in solution. The closely spaced “inside” olefinic protons are significantly more deshielded due to short-range through-space H(…)H steric interactions and appear close to or even beyond δ-values of aromatic systems. Several regularities of the computational δ((1)H) of the olefinic protons of the conjugated double bonds are reproduced very accurately for the lowest-energy DFT-optimized single conformer for all functionals used and are in very good agreement with experimental δ((1)H) in solution. Examples are provided of literature studies in which experimental resonance assignments deviate significantly from DFT predictions and, thus, should be revised. We conclude that DFT calculations of (1)H chemical shifts of trienyl compounds are powerful tools (i) for the accurate prediction of δ((1)H) even with less demanding functionals and basis sets; (ii) for the unequivocal identification of geometric isomerism of conjugated trienyl systems that occur in nature; (iii) for tackling complex problems of experimental resonance assignments due to extensive signal overlap; and (iv) for structure elucidation in solution.
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spelling pubmed-82011382021-06-15 DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments Venianakis, Themistoklis Oikonomaki, Christina Siskos, Michael G. Primikyri, Alexandra Gerothanassis, Ioannis P. Molecules Article A DFT study of the (1)H NMR chemical shifts, δ((1)H), of geometric isomers of 18:3 conjugated linolenic acids (CLnAs), hexadecatrienyl pheromones, and model triene-containing compounds is presented, using standard functionals (B3LYP and PBE0) as well as corrections for dispersion interactions (B3LYP-D3, APFD, M06–2X and ωB97XD). The results are compared with literature experimental δ((1)H) data in solution. The closely spaced “inside” olefinic protons are significantly more deshielded due to short-range through-space H(…)H steric interactions and appear close to or even beyond δ-values of aromatic systems. Several regularities of the computational δ((1)H) of the olefinic protons of the conjugated double bonds are reproduced very accurately for the lowest-energy DFT-optimized single conformer for all functionals used and are in very good agreement with experimental δ((1)H) in solution. Examples are provided of literature studies in which experimental resonance assignments deviate significantly from DFT predictions and, thus, should be revised. We conclude that DFT calculations of (1)H chemical shifts of trienyl compounds are powerful tools (i) for the accurate prediction of δ((1)H) even with less demanding functionals and basis sets; (ii) for the unequivocal identification of geometric isomerism of conjugated trienyl systems that occur in nature; (iii) for tackling complex problems of experimental resonance assignments due to extensive signal overlap; and (iv) for structure elucidation in solution. MDPI 2021-06-07 /pmc/articles/PMC8201138/ /pubmed/34200468 http://dx.doi.org/10.3390/molecules26113477 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Venianakis, Themistoklis
Oikonomaki, Christina
Siskos, Michael G.
Primikyri, Alexandra
Gerothanassis, Ioannis P.
DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title_full DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title_fullStr DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title_full_unstemmed DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title_short DFT Calculations of (1)H NMR Chemical Shifts of Geometric Isomers of Conjugated Linolenic Acids, Hexadecatrienyl Pheromones, and Model Triene-Containing Compounds: Structures in Solution and Revision of NMR Assignments
title_sort dft calculations of (1)h nmr chemical shifts of geometric isomers of conjugated linolenic acids, hexadecatrienyl pheromones, and model triene-containing compounds: structures in solution and revision of nmr assignments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201138/
https://www.ncbi.nlm.nih.gov/pubmed/34200468
http://dx.doi.org/10.3390/molecules26113477
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