Cargando…
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model
We propose a chemical language processing model to predict polymers’ glass transition temperature ([Formula: see text]) through a polymer language (SMILES, Simplified Molecular Input Line Entry System) embedding and recurrent neural network. This model only receives the SMILES strings of a polymer’s...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201381/ https://www.ncbi.nlm.nih.gov/pubmed/34200505 http://dx.doi.org/10.3390/polym13111898 |
_version_ | 1783707805715267584 |
---|---|
author | Chen, Guang Tao, Lei Li, Ying |
author_facet | Chen, Guang Tao, Lei Li, Ying |
author_sort | Chen, Guang |
collection | PubMed |
description | We propose a chemical language processing model to predict polymers’ glass transition temperature ([Formula: see text]) through a polymer language (SMILES, Simplified Molecular Input Line Entry System) embedding and recurrent neural network. This model only receives the SMILES strings of a polymer’s repeat units as inputs and considers the SMILES strings as sequential data at the character level. Using this method, there is no need to calculate any additional molecular descriptors or fingerprints of polymers, and thereby, being very computationally efficient. More importantly, it avoids the difficulties to generate molecular descriptors for repeat units containing polymerization point ‘*’. Results show that the trained model demonstrates reasonable prediction performance on unseen polymer’s [Formula: see text]. Besides, this model is further applied for high-throughput screening on an unlabeled polymer database to identify high-temperature polymers that are desired for applications in extreme environments. Our work demonstrates that the SMILES strings of polymer repeat units can be used as an effective feature representation to develop a chemical language processing model for predictions of polymer [Formula: see text]. The framework of this model is general and can be used to construct structure–property relationships for other polymer properties. |
format | Online Article Text |
id | pubmed-8201381 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-82013812021-06-15 Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model Chen, Guang Tao, Lei Li, Ying Polymers (Basel) Article We propose a chemical language processing model to predict polymers’ glass transition temperature ([Formula: see text]) through a polymer language (SMILES, Simplified Molecular Input Line Entry System) embedding and recurrent neural network. This model only receives the SMILES strings of a polymer’s repeat units as inputs and considers the SMILES strings as sequential data at the character level. Using this method, there is no need to calculate any additional molecular descriptors or fingerprints of polymers, and thereby, being very computationally efficient. More importantly, it avoids the difficulties to generate molecular descriptors for repeat units containing polymerization point ‘*’. Results show that the trained model demonstrates reasonable prediction performance on unseen polymer’s [Formula: see text]. Besides, this model is further applied for high-throughput screening on an unlabeled polymer database to identify high-temperature polymers that are desired for applications in extreme environments. Our work demonstrates that the SMILES strings of polymer repeat units can be used as an effective feature representation to develop a chemical language processing model for predictions of polymer [Formula: see text]. The framework of this model is general and can be used to construct structure–property relationships for other polymer properties. MDPI 2021-06-07 /pmc/articles/PMC8201381/ /pubmed/34200505 http://dx.doi.org/10.3390/polym13111898 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chen, Guang Tao, Lei Li, Ying Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title | Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_full | Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_fullStr | Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_full_unstemmed | Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_short | Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_sort | predicting polymers’ glass transition temperature by a chemical language processing model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201381/ https://www.ncbi.nlm.nih.gov/pubmed/34200505 http://dx.doi.org/10.3390/polym13111898 |
work_keys_str_mv | AT chenguang predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel AT taolei predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel AT liying predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel |