Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis

We have de novo assembled the genome sequence of Malassezia pachydermatis isolated from a canine otitis sample with Nanopore-only long reads. With 99× coverage and 8.23 Mbp, the genome sequence was assembled in 10 contigs, with 6 of them corresponding to chromosomes, improving the scaffolding of pre...

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Detalles Bibliográficos
Autores principales: D’Andreano, S., Viñes, J., Francino, O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201622/
https://www.ncbi.nlm.nih.gov/pubmed/34042482
http://dx.doi.org/10.1128/MRA.00205-21
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author D’Andreano, S.
Viñes, J.
Francino, O.
author_facet D’Andreano, S.
Viñes, J.
Francino, O.
author_sort D’Andreano, S.
collection PubMed
description We have de novo assembled the genome sequence of Malassezia pachydermatis isolated from a canine otitis sample with Nanopore-only long reads. With 99× coverage and 8.23 Mbp, the genome sequence was assembled in 10 contigs, with 6 of them corresponding to chromosomes, improving the scaffolding of previous genome assemblies for the species.
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spelling pubmed-82016222021-07-02 Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis D’Andreano, S. Viñes, J. Francino, O. Microbiol Resour Announc Genome Sequences We have de novo assembled the genome sequence of Malassezia pachydermatis isolated from a canine otitis sample with Nanopore-only long reads. With 99× coverage and 8.23 Mbp, the genome sequence was assembled in 10 contigs, with 6 of them corresponding to chromosomes, improving the scaffolding of previous genome assemblies for the species. American Society for Microbiology 2021-05-27 /pmc/articles/PMC8201622/ /pubmed/34042482 http://dx.doi.org/10.1128/MRA.00205-21 Text en Copyright © 2021 D’Andreano et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
D’Andreano, S.
Viñes, J.
Francino, O.
Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title_full Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title_fullStr Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title_full_unstemmed Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title_short Whole-Genome Sequencing and De Novo Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis
title_sort whole-genome sequencing and de novo assembly of malassezia pachydermatis isolated from the ear canal of a dog with otitis
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201622/
https://www.ncbi.nlm.nih.gov/pubmed/34042482
http://dx.doi.org/10.1128/MRA.00205-21
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