High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534

The oomycete Phytophthora capsici is a destructive pathogen of a wide range of vegetable hosts, especially peppers and cucurbits. A 94.17-Mb genome assembly was constructed using PacBio and Illumina data and annotated with support from transcriptome sequencing (RNA-Seq) reads.

Detalles Bibliográficos
Autores principales: Stajich, Jason E., Vu, Andrea L., Judelson, Howard S., Vogel, Gregory M., Gore, Michael A., Carlson, Maryn O., Devitt, Nicholas, Jacobi, Jennifer, Mudge, Joann, Lamour, Kurt H., Smart, Christine D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201633/
https://www.ncbi.nlm.nih.gov/pubmed/34042486
http://dx.doi.org/10.1128/MRA.00295-21
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author Stajich, Jason E.
Vu, Andrea L.
Judelson, Howard S.
Vogel, Gregory M.
Gore, Michael A.
Carlson, Maryn O.
Devitt, Nicholas
Jacobi, Jennifer
Mudge, Joann
Lamour, Kurt H.
Smart, Christine D.
author_facet Stajich, Jason E.
Vu, Andrea L.
Judelson, Howard S.
Vogel, Gregory M.
Gore, Michael A.
Carlson, Maryn O.
Devitt, Nicholas
Jacobi, Jennifer
Mudge, Joann
Lamour, Kurt H.
Smart, Christine D.
author_sort Stajich, Jason E.
collection PubMed
description The oomycete Phytophthora capsici is a destructive pathogen of a wide range of vegetable hosts, especially peppers and cucurbits. A 94.17-Mb genome assembly was constructed using PacBio and Illumina data and annotated with support from transcriptome sequencing (RNA-Seq) reads.
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spelling pubmed-82016332021-07-02 High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534 Stajich, Jason E. Vu, Andrea L. Judelson, Howard S. Vogel, Gregory M. Gore, Michael A. Carlson, Maryn O. Devitt, Nicholas Jacobi, Jennifer Mudge, Joann Lamour, Kurt H. Smart, Christine D. Microbiol Resour Announc Genome Sequences The oomycete Phytophthora capsici is a destructive pathogen of a wide range of vegetable hosts, especially peppers and cucurbits. A 94.17-Mb genome assembly was constructed using PacBio and Illumina data and annotated with support from transcriptome sequencing (RNA-Seq) reads. American Society for Microbiology 2021-05-27 /pmc/articles/PMC8201633/ /pubmed/34042486 http://dx.doi.org/10.1128/MRA.00295-21 Text en Copyright © 2021 Stajich et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Stajich, Jason E.
Vu, Andrea L.
Judelson, Howard S.
Vogel, Gregory M.
Gore, Michael A.
Carlson, Maryn O.
Devitt, Nicholas
Jacobi, Jennifer
Mudge, Joann
Lamour, Kurt H.
Smart, Christine D.
High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title_full High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title_fullStr High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title_full_unstemmed High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title_short High-Quality Reference Genome Sequence for the Oomycete Vegetable Pathogen Phytophthora capsici Strain LT1534
title_sort high-quality reference genome sequence for the oomycete vegetable pathogen phytophthora capsici strain lt1534
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201633/
https://www.ncbi.nlm.nih.gov/pubmed/34042486
http://dx.doi.org/10.1128/MRA.00295-21
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