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lamaGOET: an interface for quantum crystallography

In quantum crystallography, theoretical calculations and crystallographic refinements are closely intertwined. This means that the employed software must be able to perform both quantum-mechanical calculations and crystallographic least-squares refinements. So far, the program Tonto is the only one...

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Autores principales: Malaspina, Lorraine A., Genoni, Alessandro, Grabowsky, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202027/
https://www.ncbi.nlm.nih.gov/pubmed/34188618
http://dx.doi.org/10.1107/S1600576721002545
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author Malaspina, Lorraine A.
Genoni, Alessandro
Grabowsky, Simon
author_facet Malaspina, Lorraine A.
Genoni, Alessandro
Grabowsky, Simon
author_sort Malaspina, Lorraine A.
collection PubMed
description In quantum crystallography, theoretical calculations and crystallographic refinements are closely intertwined. This means that the employed software must be able to perform both quantum-mechanical calculations and crystallographic least-squares refinements. So far, the program Tonto is the only one able to do that. The lamaGOET interface described herein deals with this issue since it interfaces dedicated quantum-chemical software (the widely used Gaussian package and the specialized ELMOdb program) with the refinement capabilities of Tonto. Three different flavours of quantum-crystallographic refinements of the dipetide glycyl-l-threonine dihydrate are presented to showcase the capabilities of lamaGOET: Hirshfeld atom refinement (HAR), HAR-ELMO, namely HAR coupled with extremely localized molecular orbitals, and X-ray constrained wavefunction fitting.
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spelling pubmed-82020272021-06-28 lamaGOET: an interface for quantum crystallography Malaspina, Lorraine A. Genoni, Alessandro Grabowsky, Simon J Appl Crystallogr Computer Programs In quantum crystallography, theoretical calculations and crystallographic refinements are closely intertwined. This means that the employed software must be able to perform both quantum-mechanical calculations and crystallographic least-squares refinements. So far, the program Tonto is the only one able to do that. The lamaGOET interface described herein deals with this issue since it interfaces dedicated quantum-chemical software (the widely used Gaussian package and the specialized ELMOdb program) with the refinement capabilities of Tonto. Three different flavours of quantum-crystallographic refinements of the dipetide glycyl-l-threonine dihydrate are presented to showcase the capabilities of lamaGOET: Hirshfeld atom refinement (HAR), HAR-ELMO, namely HAR coupled with extremely localized molecular orbitals, and X-ray constrained wavefunction fitting. International Union of Crystallography 2021-04-16 /pmc/articles/PMC8202027/ /pubmed/34188618 http://dx.doi.org/10.1107/S1600576721002545 Text en © Lorraine A. Malaspina et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Computer Programs
Malaspina, Lorraine A.
Genoni, Alessandro
Grabowsky, Simon
lamaGOET: an interface for quantum crystallography
title lamaGOET: an interface for quantum crystallography
title_full lamaGOET: an interface for quantum crystallography
title_fullStr lamaGOET: an interface for quantum crystallography
title_full_unstemmed lamaGOET: an interface for quantum crystallography
title_short lamaGOET: an interface for quantum crystallography
title_sort lamagoet: an interface for quantum crystallography
topic Computer Programs
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202027/
https://www.ncbi.nlm.nih.gov/pubmed/34188618
http://dx.doi.org/10.1107/S1600576721002545
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