Cargando…

Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma

Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis...

Descripción completa

Detalles Bibliográficos
Autores principales: Xie, Junhao, Zhou, Xianzhu, Wang, Rui, Zhao, Jiulong, Tang, Jian, Zhang, Qichen, Du, Yiqi, Pang, Yanan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202616/
https://www.ncbi.nlm.nih.gov/pubmed/34114996
http://dx.doi.org/10.1097/MD.0000000000026135
_version_ 1783708019006111744
author Xie, Junhao
Zhou, Xianzhu
Wang, Rui
Zhao, Jiulong
Tang, Jian
Zhang, Qichen
Du, Yiqi
Pang, Yanan
author_facet Xie, Junhao
Zhou, Xianzhu
Wang, Rui
Zhao, Jiulong
Tang, Jian
Zhang, Qichen
Du, Yiqi
Pang, Yanan
author_sort Xie, Junhao
collection PubMed
description Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis (GEPIA) were used to analyze the differential expression of matrix metalloproteinases (MMPs) in PC and adjacent tissues. For further analysis, we adopted database for annotation, visualization and integrated discovery (DAVID 6.8), transcriptional regulatory relationships unraveled by sentence-based text (TRRUST) and other tools. We also identified drugs targeted the selected MMPs. Eight MMPs (MMP1, MMP2, MMP7, MMP9, MMP11, MMP12, MMP14, and MMP28) were differentially expressed in PC and adjacent tissue. MMP1 (P = .0189), MMP7 (P = .000216), MMP11 (P = .0209), MMP14 (P = .00611) were correlated with the pathological stages of PC. Patients with higher expression of MMP1 (P = .0011), MMP2 (P = .011), MMP7 (P = .0081), MMP9 (P = .046), MMP11 (P = .0019), MMP12 (P = .0011), MMP14 (P = .0011), and MMP28 (P = 6.3e-06) showed poor prognosis. Ten transcription factors were associated with the up-regulation of selected MMPs. Marimastat (DB00786) was found to target selected MMPs. Our research revealed that selected MMPs played an important role in the early diagnosis and prognosis of PC.
format Online
Article
Text
id pubmed-8202616
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Lippincott Williams & Wilkins
record_format MEDLINE/PubMed
spelling pubmed-82026162021-06-15 Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma Xie, Junhao Zhou, Xianzhu Wang, Rui Zhao, Jiulong Tang, Jian Zhang, Qichen Du, Yiqi Pang, Yanan Medicine (Baltimore) 4500 Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis (GEPIA) were used to analyze the differential expression of matrix metalloproteinases (MMPs) in PC and adjacent tissues. For further analysis, we adopted database for annotation, visualization and integrated discovery (DAVID 6.8), transcriptional regulatory relationships unraveled by sentence-based text (TRRUST) and other tools. We also identified drugs targeted the selected MMPs. Eight MMPs (MMP1, MMP2, MMP7, MMP9, MMP11, MMP12, MMP14, and MMP28) were differentially expressed in PC and adjacent tissue. MMP1 (P = .0189), MMP7 (P = .000216), MMP11 (P = .0209), MMP14 (P = .00611) were correlated with the pathological stages of PC. Patients with higher expression of MMP1 (P = .0011), MMP2 (P = .011), MMP7 (P = .0081), MMP9 (P = .046), MMP11 (P = .0019), MMP12 (P = .0011), MMP14 (P = .0011), and MMP28 (P = 6.3e-06) showed poor prognosis. Ten transcription factors were associated with the up-regulation of selected MMPs. Marimastat (DB00786) was found to target selected MMPs. Our research revealed that selected MMPs played an important role in the early diagnosis and prognosis of PC. Lippincott Williams & Wilkins 2021-06-11 /pmc/articles/PMC8202616/ /pubmed/34114996 http://dx.doi.org/10.1097/MD.0000000000026135 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/)
spellingShingle 4500
Xie, Junhao
Zhou, Xianzhu
Wang, Rui
Zhao, Jiulong
Tang, Jian
Zhang, Qichen
Du, Yiqi
Pang, Yanan
Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title_full Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title_fullStr Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title_full_unstemmed Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title_short Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
title_sort identification of potential diagnostic biomarkers in mmps for pancreatic carcinoma
topic 4500
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202616/
https://www.ncbi.nlm.nih.gov/pubmed/34114996
http://dx.doi.org/10.1097/MD.0000000000026135
work_keys_str_mv AT xiejunhao identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT zhouxianzhu identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT wangrui identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT zhaojiulong identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT tangjian identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT zhangqichen identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT duyiqi identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma
AT pangyanan identificationofpotentialdiagnosticbiomarkersinmmpsforpancreaticcarcinoma