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Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma
Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202616/ https://www.ncbi.nlm.nih.gov/pubmed/34114996 http://dx.doi.org/10.1097/MD.0000000000026135 |
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author | Xie, Junhao Zhou, Xianzhu Wang, Rui Zhao, Jiulong Tang, Jian Zhang, Qichen Du, Yiqi Pang, Yanan |
author_facet | Xie, Junhao Zhou, Xianzhu Wang, Rui Zhao, Jiulong Tang, Jian Zhang, Qichen Du, Yiqi Pang, Yanan |
author_sort | Xie, Junhao |
collection | PubMed |
description | Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis (GEPIA) were used to analyze the differential expression of matrix metalloproteinases (MMPs) in PC and adjacent tissues. For further analysis, we adopted database for annotation, visualization and integrated discovery (DAVID 6.8), transcriptional regulatory relationships unraveled by sentence-based text (TRRUST) and other tools. We also identified drugs targeted the selected MMPs. Eight MMPs (MMP1, MMP2, MMP7, MMP9, MMP11, MMP12, MMP14, and MMP28) were differentially expressed in PC and adjacent tissue. MMP1 (P = .0189), MMP7 (P = .000216), MMP11 (P = .0209), MMP14 (P = .00611) were correlated with the pathological stages of PC. Patients with higher expression of MMP1 (P = .0011), MMP2 (P = .011), MMP7 (P = .0081), MMP9 (P = .046), MMP11 (P = .0019), MMP12 (P = .0011), MMP14 (P = .0011), and MMP28 (P = 6.3e-06) showed poor prognosis. Ten transcription factors were associated with the up-regulation of selected MMPs. Marimastat (DB00786) was found to target selected MMPs. Our research revealed that selected MMPs played an important role in the early diagnosis and prognosis of PC. |
format | Online Article Text |
id | pubmed-8202616 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-82026162021-06-15 Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma Xie, Junhao Zhou, Xianzhu Wang, Rui Zhao, Jiulong Tang, Jian Zhang, Qichen Du, Yiqi Pang, Yanan Medicine (Baltimore) 4500 Pancreatic cancer (PC) is a malignant tumor which ranks fourth in cancer-related death. However, the specificity and sensitivity of traditional biomarkers such as carbohydrate antigen 19-9 no longer meet the clinical requirements. Tools as ONCOMINE and Gene Expression Profiling Interactive Analysis (GEPIA) were used to analyze the differential expression of matrix metalloproteinases (MMPs) in PC and adjacent tissues. For further analysis, we adopted database for annotation, visualization and integrated discovery (DAVID 6.8), transcriptional regulatory relationships unraveled by sentence-based text (TRRUST) and other tools. We also identified drugs targeted the selected MMPs. Eight MMPs (MMP1, MMP2, MMP7, MMP9, MMP11, MMP12, MMP14, and MMP28) were differentially expressed in PC and adjacent tissue. MMP1 (P = .0189), MMP7 (P = .000216), MMP11 (P = .0209), MMP14 (P = .00611) were correlated with the pathological stages of PC. Patients with higher expression of MMP1 (P = .0011), MMP2 (P = .011), MMP7 (P = .0081), MMP9 (P = .046), MMP11 (P = .0019), MMP12 (P = .0011), MMP14 (P = .0011), and MMP28 (P = 6.3e-06) showed poor prognosis. Ten transcription factors were associated with the up-regulation of selected MMPs. Marimastat (DB00786) was found to target selected MMPs. Our research revealed that selected MMPs played an important role in the early diagnosis and prognosis of PC. Lippincott Williams & Wilkins 2021-06-11 /pmc/articles/PMC8202616/ /pubmed/34114996 http://dx.doi.org/10.1097/MD.0000000000026135 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) |
spellingShingle | 4500 Xie, Junhao Zhou, Xianzhu Wang, Rui Zhao, Jiulong Tang, Jian Zhang, Qichen Du, Yiqi Pang, Yanan Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title | Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title_full | Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title_fullStr | Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title_full_unstemmed | Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title_short | Identification of potential diagnostic biomarkers in MMPs for pancreatic carcinoma |
title_sort | identification of potential diagnostic biomarkers in mmps for pancreatic carcinoma |
topic | 4500 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202616/ https://www.ncbi.nlm.nih.gov/pubmed/34114996 http://dx.doi.org/10.1097/MD.0000000000026135 |
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