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Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probabilit...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202781/ https://www.ncbi.nlm.nih.gov/pubmed/33687840 http://dx.doi.org/10.1109/TMI.2021.3064661 |
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author | Aganj, Iman Fischl, Bruce |
author_facet | Aganj, Iman Fischl, Bruce |
author_sort | Aganj, Iman |
collection | PubMed |
description | The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probability of all possible atlas-to-image transformations and compute the expected label value (ELV), thereby not relying merely on the transformation deemed “optimal” by the registration method. Moreover, we do so without actually performing deformable registration, thus avoiding the associated computational costs. We evaluate our ELV computation approach by applying it to brain, liver, and pancreas segmentation on datasets of magnetic resonance and computed tomography images. |
format | Online Article Text |
id | pubmed-8202781 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-82027812021-06-14 Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value Aganj, Iman Fischl, Bruce IEEE Trans Med Imaging Article The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probability of all possible atlas-to-image transformations and compute the expected label value (ELV), thereby not relying merely on the transformation deemed “optimal” by the registration method. Moreover, we do so without actually performing deformable registration, thus avoiding the associated computational costs. We evaluate our ELV computation approach by applying it to brain, liver, and pancreas segmentation on datasets of magnetic resonance and computed tomography images. 2021-06-01 2021-06 /pmc/articles/PMC8202781/ /pubmed/33687840 http://dx.doi.org/10.1109/TMI.2021.3064661 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 License. For more information, see https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Aganj, Iman Fischl, Bruce Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title | Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title_full | Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title_fullStr | Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title_full_unstemmed | Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title_short | Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value |
title_sort | multi-atlas image soft segmentation via computation of the expected label value |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202781/ https://www.ncbi.nlm.nih.gov/pubmed/33687840 http://dx.doi.org/10.1109/TMI.2021.3064661 |
work_keys_str_mv | AT aganjiman multiatlasimagesoftsegmentationviacomputationoftheexpectedlabelvalue AT fischlbruce multiatlasimagesoftsegmentationviacomputationoftheexpectedlabelvalue |