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Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value

The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probabilit...

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Detalles Bibliográficos
Autores principales: Aganj, Iman, Fischl, Bruce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202781/
https://www.ncbi.nlm.nih.gov/pubmed/33687840
http://dx.doi.org/10.1109/TMI.2021.3064661
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author Aganj, Iman
Fischl, Bruce
author_facet Aganj, Iman
Fischl, Bruce
author_sort Aganj, Iman
collection PubMed
description The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probability of all possible atlas-to-image transformations and compute the expected label value (ELV), thereby not relying merely on the transformation deemed “optimal” by the registration method. Moreover, we do so without actually performing deformable registration, thus avoiding the associated computational costs. We evaluate our ELV computation approach by applying it to brain, liver, and pancreas segmentation on datasets of magnetic resonance and computed tomography images.
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spelling pubmed-82027812021-06-14 Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value Aganj, Iman Fischl, Bruce IEEE Trans Med Imaging Article The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probability of all possible atlas-to-image transformations and compute the expected label value (ELV), thereby not relying merely on the transformation deemed “optimal” by the registration method. Moreover, we do so without actually performing deformable registration, thus avoiding the associated computational costs. We evaluate our ELV computation approach by applying it to brain, liver, and pancreas segmentation on datasets of magnetic resonance and computed tomography images. 2021-06-01 2021-06 /pmc/articles/PMC8202781/ /pubmed/33687840 http://dx.doi.org/10.1109/TMI.2021.3064661 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 License. For more information, see https://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Aganj, Iman
Fischl, Bruce
Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title_full Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title_fullStr Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title_full_unstemmed Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title_short Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value
title_sort multi-atlas image soft segmentation via computation of the expected label value
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202781/
https://www.ncbi.nlm.nih.gov/pubmed/33687840
http://dx.doi.org/10.1109/TMI.2021.3064661
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