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Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) famil...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202856/ https://www.ncbi.nlm.nih.gov/pubmed/33962392 http://dx.doi.org/10.18632/aging.202982 |
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author | Dai, Zhou-Tong Xiang, Yuan Wang, Yundan Bao, Le-Yuan Wang, Jun Li, Jia-Peng Zhang, Hui-Min Lu, Zhongxin Ponnambalam, Sreenivasan Liao, Xing-Hua |
author_facet | Dai, Zhou-Tong Xiang, Yuan Wang, Yundan Bao, Le-Yuan Wang, Jun Li, Jia-Peng Zhang, Hui-Min Lu, Zhongxin Ponnambalam, Sreenivasan Liao, Xing-Hua |
author_sort | Dai, Zhou-Tong |
collection | PubMed |
description | Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) family are involved in BLCA progression and subsequent interaction(s) with immune surveillance. In this study, we carried out a pan-cancer analysis of the NFAT family and found that NFAT2 is an independent prognostic factor for BLCA. We then screened for differentially expressed genes (DEGs) and further analyzed such candidate gene loci using gene ontology enrichment to curate the KEGG database. We then used Lasso and multivariate Cox regression to identify 4 gene loci (FER1L4, RNF128, EPHB6, and FN1) which were screened together with NFAT2 to construct a prognostic model based on using Kaplan-Meier analysis to predict the overall survival of BLCA patients. Moreover, the accuracy of our proposed model is supported by deposited datasets in the Gene Expression Omnibus (GEO) database. Finally, a nomogram of this prognosis model for BLCA was established which could help to provide better disease management and treatment. |
format | Online Article Text |
id | pubmed-8202856 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-82028562021-06-15 Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer Dai, Zhou-Tong Xiang, Yuan Wang, Yundan Bao, Le-Yuan Wang, Jun Li, Jia-Peng Zhang, Hui-Min Lu, Zhongxin Ponnambalam, Sreenivasan Liao, Xing-Hua Aging (Albany NY) Research Paper Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) family are involved in BLCA progression and subsequent interaction(s) with immune surveillance. In this study, we carried out a pan-cancer analysis of the NFAT family and found that NFAT2 is an independent prognostic factor for BLCA. We then screened for differentially expressed genes (DEGs) and further analyzed such candidate gene loci using gene ontology enrichment to curate the KEGG database. We then used Lasso and multivariate Cox regression to identify 4 gene loci (FER1L4, RNF128, EPHB6, and FN1) which were screened together with NFAT2 to construct a prognostic model based on using Kaplan-Meier analysis to predict the overall survival of BLCA patients. Moreover, the accuracy of our proposed model is supported by deposited datasets in the Gene Expression Omnibus (GEO) database. Finally, a nomogram of this prognosis model for BLCA was established which could help to provide better disease management and treatment. Impact Journals 2021-05-07 /pmc/articles/PMC8202856/ /pubmed/33962392 http://dx.doi.org/10.18632/aging.202982 Text en Copyright: © 2021 Dai et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Dai, Zhou-Tong Xiang, Yuan Wang, Yundan Bao, Le-Yuan Wang, Jun Li, Jia-Peng Zhang, Hui-Min Lu, Zhongxin Ponnambalam, Sreenivasan Liao, Xing-Hua Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title | Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title_full | Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title_fullStr | Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title_full_unstemmed | Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title_short | Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer |
title_sort | prognostic value of members of nfat family for pan-cancer and a prediction model based on nfat2 in bladder cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202856/ https://www.ncbi.nlm.nih.gov/pubmed/33962392 http://dx.doi.org/10.18632/aging.202982 |
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