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Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer

Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) famil...

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Autores principales: Dai, Zhou-Tong, Xiang, Yuan, Wang, Yundan, Bao, Le-Yuan, Wang, Jun, Li, Jia-Peng, Zhang, Hui-Min, Lu, Zhongxin, Ponnambalam, Sreenivasan, Liao, Xing-Hua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202856/
https://www.ncbi.nlm.nih.gov/pubmed/33962392
http://dx.doi.org/10.18632/aging.202982
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author Dai, Zhou-Tong
Xiang, Yuan
Wang, Yundan
Bao, Le-Yuan
Wang, Jun
Li, Jia-Peng
Zhang, Hui-Min
Lu, Zhongxin
Ponnambalam, Sreenivasan
Liao, Xing-Hua
author_facet Dai, Zhou-Tong
Xiang, Yuan
Wang, Yundan
Bao, Le-Yuan
Wang, Jun
Li, Jia-Peng
Zhang, Hui-Min
Lu, Zhongxin
Ponnambalam, Sreenivasan
Liao, Xing-Hua
author_sort Dai, Zhou-Tong
collection PubMed
description Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) family are involved in BLCA progression and subsequent interaction(s) with immune surveillance. In this study, we carried out a pan-cancer analysis of the NFAT family and found that NFAT2 is an independent prognostic factor for BLCA. We then screened for differentially expressed genes (DEGs) and further analyzed such candidate gene loci using gene ontology enrichment to curate the KEGG database. We then used Lasso and multivariate Cox regression to identify 4 gene loci (FER1L4, RNF128, EPHB6, and FN1) which were screened together with NFAT2 to construct a prognostic model based on using Kaplan-Meier analysis to predict the overall survival of BLCA patients. Moreover, the accuracy of our proposed model is supported by deposited datasets in the Gene Expression Omnibus (GEO) database. Finally, a nomogram of this prognosis model for BLCA was established which could help to provide better disease management and treatment.
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spelling pubmed-82028562021-06-15 Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer Dai, Zhou-Tong Xiang, Yuan Wang, Yundan Bao, Le-Yuan Wang, Jun Li, Jia-Peng Zhang, Hui-Min Lu, Zhongxin Ponnambalam, Sreenivasan Liao, Xing-Hua Aging (Albany NY) Research Paper Bladder cancer (BLCA) is one of the common malignant tumors of the urinary system. The poor prognosis of BLCA patients is due to the lack of early diagnosis and disease recurrence after treatment. Increasing evidence suggests that gene products of the nuclear factor of activated T-cells (NFAT) family are involved in BLCA progression and subsequent interaction(s) with immune surveillance. In this study, we carried out a pan-cancer analysis of the NFAT family and found that NFAT2 is an independent prognostic factor for BLCA. We then screened for differentially expressed genes (DEGs) and further analyzed such candidate gene loci using gene ontology enrichment to curate the KEGG database. We then used Lasso and multivariate Cox regression to identify 4 gene loci (FER1L4, RNF128, EPHB6, and FN1) which were screened together with NFAT2 to construct a prognostic model based on using Kaplan-Meier analysis to predict the overall survival of BLCA patients. Moreover, the accuracy of our proposed model is supported by deposited datasets in the Gene Expression Omnibus (GEO) database. Finally, a nomogram of this prognosis model for BLCA was established which could help to provide better disease management and treatment. Impact Journals 2021-05-07 /pmc/articles/PMC8202856/ /pubmed/33962392 http://dx.doi.org/10.18632/aging.202982 Text en Copyright: © 2021 Dai et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Dai, Zhou-Tong
Xiang, Yuan
Wang, Yundan
Bao, Le-Yuan
Wang, Jun
Li, Jia-Peng
Zhang, Hui-Min
Lu, Zhongxin
Ponnambalam, Sreenivasan
Liao, Xing-Hua
Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title_full Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title_fullStr Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title_full_unstemmed Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title_short Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
title_sort prognostic value of members of nfat family for pan-cancer and a prediction model based on nfat2 in bladder cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8202856/
https://www.ncbi.nlm.nih.gov/pubmed/33962392
http://dx.doi.org/10.18632/aging.202982
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