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Aberrant Methylation of Aging-Related Genes in Asthma
Background: Asthma is a complex pulmonary inflammatory disease which is common among older adults. Aging-related alterations have also been found in structural cells and immune cells of asthma patients. Nonetheless, the underlying mechanism by which differenced aging-related gene contributes to asth...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8203316/ https://www.ncbi.nlm.nih.gov/pubmed/34136532 http://dx.doi.org/10.3389/fmolb.2021.655285 |
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author | Yang, Yu Yuan, Lin Yang, Ming Du, Xizi Qin, Ling Wang, Leyuan Zhou, Kai Wu, Mengping He, Ruoxi Feng, Juntao Xiang, Yang Qu, Xiangping Liu, Huijun Qin, Xiaoqun Liu, Chi |
author_facet | Yang, Yu Yuan, Lin Yang, Ming Du, Xizi Qin, Ling Wang, Leyuan Zhou, Kai Wu, Mengping He, Ruoxi Feng, Juntao Xiang, Yang Qu, Xiangping Liu, Huijun Qin, Xiaoqun Liu, Chi |
author_sort | Yang, Yu |
collection | PubMed |
description | Background: Asthma is a complex pulmonary inflammatory disease which is common among older adults. Aging-related alterations have also been found in structural cells and immune cells of asthma patients. Nonetheless, the underlying mechanism by which differenced aging-related gene contributes to asthma pathology remains unclear. Of note, DNA methylation (DNAm) has been proven to play a critical mechanism for age-related gene expression changes. However, the methylation changes of aging-related genes in asthma patients are still obscure. Methods: First, changes in DNAm and gene expression were detected with multiple targeted bisulfite enrichment sequencing (MethTarget) and qPCR in peripheral blood of 51 healthy controls (HCs) and 55 asthmatic patients. Second, the correlation between the DNAm levels of specific altered CpG sites and the pulmonary function indicators of asthma patients was evaluated. Last, the receiver operator characteristic (ROC) curve and principal component analysis (PCA) were used to identify the feasibility of the candidate CpG sites as biomarkers for asthma. Results: Compared with HCs, there was a differential mRNA expression for nine aging-related genes in peripheral blood of asthma patients. Besides, the methylation levels of the nine aging-related genes were also altered in asthma patients, and a total of 68 CpG sites were associated with the severity of asthma. Notably, 9 of the 68 CpG sites were significantly associated with pulmonary function parameters. Moreover, ROC curve and PCA analysis showed that the candidate differential methylation sites (DMSs) can be used as potential biomarkers for asthma. Conclusions: In summary, this study confirmed the differentially expressed mRNA and aberrant DNAm level of aging-related genes in asthma patients. DMSs are associated with the clinical evaluation indicators of asthma, which indicate the involvement of aging-related genes in the pathogenesis of asthma and provide some new possible biomarkers for asthma. |
format | Online Article Text |
id | pubmed-8203316 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82033162021-06-15 Aberrant Methylation of Aging-Related Genes in Asthma Yang, Yu Yuan, Lin Yang, Ming Du, Xizi Qin, Ling Wang, Leyuan Zhou, Kai Wu, Mengping He, Ruoxi Feng, Juntao Xiang, Yang Qu, Xiangping Liu, Huijun Qin, Xiaoqun Liu, Chi Front Mol Biosci Molecular Biosciences Background: Asthma is a complex pulmonary inflammatory disease which is common among older adults. Aging-related alterations have also been found in structural cells and immune cells of asthma patients. Nonetheless, the underlying mechanism by which differenced aging-related gene contributes to asthma pathology remains unclear. Of note, DNA methylation (DNAm) has been proven to play a critical mechanism for age-related gene expression changes. However, the methylation changes of aging-related genes in asthma patients are still obscure. Methods: First, changes in DNAm and gene expression were detected with multiple targeted bisulfite enrichment sequencing (MethTarget) and qPCR in peripheral blood of 51 healthy controls (HCs) and 55 asthmatic patients. Second, the correlation between the DNAm levels of specific altered CpG sites and the pulmonary function indicators of asthma patients was evaluated. Last, the receiver operator characteristic (ROC) curve and principal component analysis (PCA) were used to identify the feasibility of the candidate CpG sites as biomarkers for asthma. Results: Compared with HCs, there was a differential mRNA expression for nine aging-related genes in peripheral blood of asthma patients. Besides, the methylation levels of the nine aging-related genes were also altered in asthma patients, and a total of 68 CpG sites were associated with the severity of asthma. Notably, 9 of the 68 CpG sites were significantly associated with pulmonary function parameters. Moreover, ROC curve and PCA analysis showed that the candidate differential methylation sites (DMSs) can be used as potential biomarkers for asthma. Conclusions: In summary, this study confirmed the differentially expressed mRNA and aberrant DNAm level of aging-related genes in asthma patients. DMSs are associated with the clinical evaluation indicators of asthma, which indicate the involvement of aging-related genes in the pathogenesis of asthma and provide some new possible biomarkers for asthma. Frontiers Media S.A. 2021-05-25 /pmc/articles/PMC8203316/ /pubmed/34136532 http://dx.doi.org/10.3389/fmolb.2021.655285 Text en Copyright © 2021 Yang, Yuan, Yang, Du, Qin, Wang, Zhou, Wu, He, Feng, Xiang, Qu, Liu, Qin and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Yang, Yu Yuan, Lin Yang, Ming Du, Xizi Qin, Ling Wang, Leyuan Zhou, Kai Wu, Mengping He, Ruoxi Feng, Juntao Xiang, Yang Qu, Xiangping Liu, Huijun Qin, Xiaoqun Liu, Chi Aberrant Methylation of Aging-Related Genes in Asthma |
title | Aberrant Methylation of Aging-Related Genes in Asthma |
title_full | Aberrant Methylation of Aging-Related Genes in Asthma |
title_fullStr | Aberrant Methylation of Aging-Related Genes in Asthma |
title_full_unstemmed | Aberrant Methylation of Aging-Related Genes in Asthma |
title_short | Aberrant Methylation of Aging-Related Genes in Asthma |
title_sort | aberrant methylation of aging-related genes in asthma |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8203316/ https://www.ncbi.nlm.nih.gov/pubmed/34136532 http://dx.doi.org/10.3389/fmolb.2021.655285 |
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