Cargando…

Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance

The mTOR pathway, a major signaling pathway, regulates cell growth and protein synthesis by activating itself in response to upstream signals. Overactivation of the mTOR pathway may affect the occurrence and development of cancer, but no specific treatment has been proposed for targeting the mTOR pa...

Descripción completa

Detalles Bibliográficos
Autores principales: Che, Xiangyu, Qi, Xiaochen, Xu, Yingkun, Wang, Qifei, Wu, Guangzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8203410/
https://www.ncbi.nlm.nih.gov/pubmed/34194607
http://dx.doi.org/10.1155/2021/6613151
_version_ 1783708167583039488
author Che, Xiangyu
Qi, Xiaochen
Xu, Yingkun
Wang, Qifei
Wu, Guangzhen
author_facet Che, Xiangyu
Qi, Xiaochen
Xu, Yingkun
Wang, Qifei
Wu, Guangzhen
author_sort Che, Xiangyu
collection PubMed
description The mTOR pathway, a major signaling pathway, regulates cell growth and protein synthesis by activating itself in response to upstream signals. Overactivation of the mTOR pathway may affect the occurrence and development of cancer, but no specific treatment has been proposed for targeting the mTOR pathway. In this study, we explored the expression of mTOR pathway genes in a variety of cancers and the potential compounds that target the mTOR pathway and focused on an abnormal type of cancer, kidney renal clear cell carcinoma (KIRC). Based on the mRNA expression of the mTOR pathway gene, we divided KIRC patient samples into three clusters. We explored possible therapeutic targets of the mTOR pathway in KIRC. We predicted the IC50 of some classical targeted drugs to analyze their correlation with the mTOR pathway. Subsequently, we investigated the correlation of the mTOR pathway with histone modification and immune infiltration, as well as the response to anti-PD-1 and anti-CTLA-4 therapy. Finally, we used a LASSO regression analysis to construct a model to predict the survival of patients with KIRC. This study shows that mTOR scores can be used as tools to study various treatments targeting the mTOR pathway and that we can predict the recovery of KIRC patients through the expression of mTOR pathway genes. These research results can provide a reference for future research on KIRC patient treatment strategies.
format Online
Article
Text
id pubmed-8203410
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-82034102021-06-29 Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance Che, Xiangyu Qi, Xiaochen Xu, Yingkun Wang, Qifei Wu, Guangzhen Oxid Med Cell Longev Research Article The mTOR pathway, a major signaling pathway, regulates cell growth and protein synthesis by activating itself in response to upstream signals. Overactivation of the mTOR pathway may affect the occurrence and development of cancer, but no specific treatment has been proposed for targeting the mTOR pathway. In this study, we explored the expression of mTOR pathway genes in a variety of cancers and the potential compounds that target the mTOR pathway and focused on an abnormal type of cancer, kidney renal clear cell carcinoma (KIRC). Based on the mRNA expression of the mTOR pathway gene, we divided KIRC patient samples into three clusters. We explored possible therapeutic targets of the mTOR pathway in KIRC. We predicted the IC50 of some classical targeted drugs to analyze their correlation with the mTOR pathway. Subsequently, we investigated the correlation of the mTOR pathway with histone modification and immune infiltration, as well as the response to anti-PD-1 and anti-CTLA-4 therapy. Finally, we used a LASSO regression analysis to construct a model to predict the survival of patients with KIRC. This study shows that mTOR scores can be used as tools to study various treatments targeting the mTOR pathway and that we can predict the recovery of KIRC patients through the expression of mTOR pathway genes. These research results can provide a reference for future research on KIRC patient treatment strategies. Hindawi 2021-06-07 /pmc/articles/PMC8203410/ /pubmed/34194607 http://dx.doi.org/10.1155/2021/6613151 Text en Copyright © 2021 Xiangyu Che et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Che, Xiangyu
Qi, Xiaochen
Xu, Yingkun
Wang, Qifei
Wu, Guangzhen
Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title_full Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title_fullStr Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title_full_unstemmed Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title_short Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance
title_sort genomic and transcriptome analysis to identify the role of the mtor pathway in kidney renal clear cell carcinoma and its potential therapeutic significance
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8203410/
https://www.ncbi.nlm.nih.gov/pubmed/34194607
http://dx.doi.org/10.1155/2021/6613151
work_keys_str_mv AT chexiangyu genomicandtranscriptomeanalysistoidentifytheroleofthemtorpathwayinkidneyrenalclearcellcarcinomaanditspotentialtherapeuticsignificance
AT qixiaochen genomicandtranscriptomeanalysistoidentifytheroleofthemtorpathwayinkidneyrenalclearcellcarcinomaanditspotentialtherapeuticsignificance
AT xuyingkun genomicandtranscriptomeanalysistoidentifytheroleofthemtorpathwayinkidneyrenalclearcellcarcinomaanditspotentialtherapeuticsignificance
AT wangqifei genomicandtranscriptomeanalysistoidentifytheroleofthemtorpathwayinkidneyrenalclearcellcarcinomaanditspotentialtherapeuticsignificance
AT wuguangzhen genomicandtranscriptomeanalysistoidentifytheroleofthemtorpathwayinkidneyrenalclearcellcarcinomaanditspotentialtherapeuticsignificance