Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)

Hibiscus tiliaceus is a semi-mangrove species that is widely distributed in tropical and subtropical coastal areas around the world. Here, the complete chloroplast (cp) genome sequence of H. tiliaceus was assembled and characterized. The cp genome was 161,748 bp in length, consisting of a large sing...

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Detalles Bibliográficos
Autores principales: Hu, Gang, Hu, Cong, Peng, Xingbing, Lu, Shaonuan, Zhang, Zhonghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8204996/
https://www.ncbi.nlm.nih.gov/pubmed/34179470
http://dx.doi.org/10.1080/23802359.2021.1935337
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author Hu, Gang
Hu, Cong
Peng, Xingbing
Lu, Shaonuan
Zhang, Zhonghua
author_facet Hu, Gang
Hu, Cong
Peng, Xingbing
Lu, Shaonuan
Zhang, Zhonghua
author_sort Hu, Gang
collection PubMed
description Hibiscus tiliaceus is a semi-mangrove species that is widely distributed in tropical and subtropical coastal areas around the world. Here, the complete chloroplast (cp) genome sequence of H. tiliaceus was assembled and characterized. The cp genome was 161,748 bp in length, consisting of a large single copy (LSC) region of 89,190 bp and a small single copy (SSC) region of 19,616 bp, which were separated by a pair of 26,471 bp inverted repeat (IR) regions. The overall GC content was 36.88%. A total of 131 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes were identified. Phylogenetic tree reconstructed by 15 complete cp genomes revealed that H. tiliaceus was sister to the congeneric species H. cannabinus.
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spelling pubmed-82049962021-06-24 Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae) Hu, Gang Hu, Cong Peng, Xingbing Lu, Shaonuan Zhang, Zhonghua Mitochondrial DNA B Resour Mitogenome Announcement Hibiscus tiliaceus is a semi-mangrove species that is widely distributed in tropical and subtropical coastal areas around the world. Here, the complete chloroplast (cp) genome sequence of H. tiliaceus was assembled and characterized. The cp genome was 161,748 bp in length, consisting of a large single copy (LSC) region of 89,190 bp and a small single copy (SSC) region of 19,616 bp, which were separated by a pair of 26,471 bp inverted repeat (IR) regions. The overall GC content was 36.88%. A total of 131 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes were identified. Phylogenetic tree reconstructed by 15 complete cp genomes revealed that H. tiliaceus was sister to the congeneric species H. cannabinus. Taylor & Francis 2021-06-14 /pmc/articles/PMC8204996/ /pubmed/34179470 http://dx.doi.org/10.1080/23802359.2021.1935337 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Hu, Gang
Hu, Cong
Peng, Xingbing
Lu, Shaonuan
Zhang, Zhonghua
Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title_full Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title_fullStr Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title_full_unstemmed Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title_short Complete chloroplast genome of a semi-mangrove plant Hibiscus tiliaceus (Malvaceae)
title_sort complete chloroplast genome of a semi-mangrove plant hibiscus tiliaceus (malvaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8204996/
https://www.ncbi.nlm.nih.gov/pubmed/34179470
http://dx.doi.org/10.1080/23802359.2021.1935337
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