The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)

Gynandropsis gynandra (L.) Briquet is a monoecious herb species in the family Cleomaceae. It is an important commercial crop with medicinal and nutritional values. Here, we sequenced, assembled, and analyzed the complete chloroplast genome of G. gynandra. The circular genome is 158,152 bp in size, c...

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Detalles Bibliográficos
Autores principales: Shi, Dawei, Li, Jinyu, Li, Yong, Li, Yao, Xie, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8204997/
https://www.ncbi.nlm.nih.gov/pubmed/34179471
http://dx.doi.org/10.1080/23802359.2021.1935339
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author Shi, Dawei
Li, Jinyu
Li, Yong
Li, Yao
Xie, Lei
author_facet Shi, Dawei
Li, Jinyu
Li, Yong
Li, Yao
Xie, Lei
author_sort Shi, Dawei
collection PubMed
description Gynandropsis gynandra (L.) Briquet is a monoecious herb species in the family Cleomaceae. It is an important commercial crop with medicinal and nutritional values. Here, we sequenced, assembled, and analyzed the complete chloroplast genome of G. gynandra. The circular genome is 158,152 bp in size, consisting of two copies of inverted repeat (IR) regions of 26,181 bp, one large single-copy (LSC) region of 87,242 bp, and one small single-copy (SSC) region of 18,548 bp. The overall GC content was 35.81%. A total of 131 genes were annotated, including 37 tRNA genes, 87 protein-coding genes, and seven rRNA genes. Phylogenetic analysis based on 10 chloroplast genome sequences indicated that G. gynandra was more closely related to Tarenaya hassleriana.
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spelling pubmed-82049972021-06-24 The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae) Shi, Dawei Li, Jinyu Li, Yong Li, Yao Xie, Lei Mitochondrial DNA B Resour Mitogenome Announcement Gynandropsis gynandra (L.) Briquet is a monoecious herb species in the family Cleomaceae. It is an important commercial crop with medicinal and nutritional values. Here, we sequenced, assembled, and analyzed the complete chloroplast genome of G. gynandra. The circular genome is 158,152 bp in size, consisting of two copies of inverted repeat (IR) regions of 26,181 bp, one large single-copy (LSC) region of 87,242 bp, and one small single-copy (SSC) region of 18,548 bp. The overall GC content was 35.81%. A total of 131 genes were annotated, including 37 tRNA genes, 87 protein-coding genes, and seven rRNA genes. Phylogenetic analysis based on 10 chloroplast genome sequences indicated that G. gynandra was more closely related to Tarenaya hassleriana. Taylor & Francis 2021-06-14 /pmc/articles/PMC8204997/ /pubmed/34179471 http://dx.doi.org/10.1080/23802359.2021.1935339 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Shi, Dawei
Li, Jinyu
Li, Yong
Li, Yao
Xie, Lei
The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title_full The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title_fullStr The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title_full_unstemmed The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title_short The complete chloroplast genome sequence of Gynandropsis gynandra (Cleomaceae)
title_sort complete chloroplast genome sequence of gynandropsis gynandra (cleomaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8204997/
https://www.ncbi.nlm.nih.gov/pubmed/34179471
http://dx.doi.org/10.1080/23802359.2021.1935339
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