Cargando…

The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult

Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-c...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Junfeng, Du, Wenxuan, Pang, Yongzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205081/
https://www.ncbi.nlm.nih.gov/pubmed/34179482
http://dx.doi.org/10.1080/23802359.2021.1938721
_version_ 1783708437988769792
author Yang, Junfeng
Du, Wenxuan
Pang, Yongzhen
author_facet Yang, Junfeng
Du, Wenxuan
Pang, Yongzhen
author_sort Yang, Junfeng
collection PubMed
description Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-copy region of 12,760 bp, and two inverted repeat regions of 21,541 bp. The genome consisted of 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC contents was 38.32%. We constructed the Maximum likelihood (ML) tree with 13 species from the Hordeinae genus, and concluded that A. desertorum was closely related to plant species of the Elymus genus in the phylogenetic tree.
format Online
Article
Text
id pubmed-8205081
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-82050812021-06-24 The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult Yang, Junfeng Du, Wenxuan Pang, Yongzhen Mitochondrial DNA B Resour Mitogenome Announcement Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-copy region of 12,760 bp, and two inverted repeat regions of 21,541 bp. The genome consisted of 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC contents was 38.32%. We constructed the Maximum likelihood (ML) tree with 13 species from the Hordeinae genus, and concluded that A. desertorum was closely related to plant species of the Elymus genus in the phylogenetic tree. Taylor & Francis 2021-06-14 /pmc/articles/PMC8205081/ /pubmed/34179482 http://dx.doi.org/10.1080/23802359.2021.1938721 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Junfeng
Du, Wenxuan
Pang, Yongzhen
The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title_full The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title_fullStr The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title_full_unstemmed The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title_short The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
title_sort complete chloroplast genome of agropyron desertorum (fisch. ex link) schult
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205081/
https://www.ncbi.nlm.nih.gov/pubmed/34179482
http://dx.doi.org/10.1080/23802359.2021.1938721
work_keys_str_mv AT yangjunfeng thecompletechloroplastgenomeofagropyrondesertorumfischexlinkschult
AT duwenxuan thecompletechloroplastgenomeofagropyrondesertorumfischexlinkschult
AT pangyongzhen thecompletechloroplastgenomeofagropyrondesertorumfischexlinkschult
AT yangjunfeng completechloroplastgenomeofagropyrondesertorumfischexlinkschult
AT duwenxuan completechloroplastgenomeofagropyrondesertorumfischexlinkschult
AT pangyongzhen completechloroplastgenomeofagropyrondesertorumfischexlinkschult