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The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult
Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-c...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205081/ https://www.ncbi.nlm.nih.gov/pubmed/34179482 http://dx.doi.org/10.1080/23802359.2021.1938721 |
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author | Yang, Junfeng Du, Wenxuan Pang, Yongzhen |
author_facet | Yang, Junfeng Du, Wenxuan Pang, Yongzhen |
author_sort | Yang, Junfeng |
collection | PubMed |
description | Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-copy region of 12,760 bp, and two inverted repeat regions of 21,541 bp. The genome consisted of 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC contents was 38.32%. We constructed the Maximum likelihood (ML) tree with 13 species from the Hordeinae genus, and concluded that A. desertorum was closely related to plant species of the Elymus genus in the phylogenetic tree. |
format | Online Article Text |
id | pubmed-8205081 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82050812021-06-24 The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult Yang, Junfeng Du, Wenxuan Pang, Yongzhen Mitochondrial DNA B Resour Mitogenome Announcement Agropyron desertorum is one of the most important fodder grasses which distributes in the temperate regions of the world. In this study, the complete chloroplast genome of A. desertorum was sequenced. The genome was 135,459 bp in length, with a large single-copy region of 79,617 bp, a small single-copy region of 12,760 bp, and two inverted repeat regions of 21,541 bp. The genome consisted of 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC contents was 38.32%. We constructed the Maximum likelihood (ML) tree with 13 species from the Hordeinae genus, and concluded that A. desertorum was closely related to plant species of the Elymus genus in the phylogenetic tree. Taylor & Francis 2021-06-14 /pmc/articles/PMC8205081/ /pubmed/34179482 http://dx.doi.org/10.1080/23802359.2021.1938721 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yang, Junfeng Du, Wenxuan Pang, Yongzhen The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title | The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title_full | The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title_fullStr | The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title_full_unstemmed | The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title_short | The complete chloroplast genome of Agropyron desertorum (Fisch. ex Link) Schult |
title_sort | complete chloroplast genome of agropyron desertorum (fisch. ex link) schult |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205081/ https://www.ncbi.nlm.nih.gov/pubmed/34179482 http://dx.doi.org/10.1080/23802359.2021.1938721 |
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