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The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)

Saussurea wettsteiniana is a medicinally important herb endemic to Hengduan Mountains. Here, we report and characterize the complete chloroplast genome sequence of S. wettsteiniana to provide genomic resources useful for future study. The complete chloroplast genome is 152,631 bp in length, consisti...

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Autores principales: Luo, Deng-Li, Zhang, Ying-Min, Zhang, Ti-Cao, Li, Guo-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205082/
https://www.ncbi.nlm.nih.gov/pubmed/34179496
http://dx.doi.org/10.1080/23802359.2021.1939178
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author Luo, Deng-Li
Zhang, Ying-Min
Zhang, Ti-Cao
Li, Guo-Dong
author_facet Luo, Deng-Li
Zhang, Ying-Min
Zhang, Ti-Cao
Li, Guo-Dong
author_sort Luo, Deng-Li
collection PubMed
description Saussurea wettsteiniana is a medicinally important herb endemic to Hengduan Mountains. Here, we report and characterize the complete chloroplast genome sequence of S. wettsteiniana to provide genomic resources useful for future study. The complete chloroplast genome is 152,631 bp in length, consisting of a large single copy and a small single copy of 83,552 bp and 18,637 bp, which were separated by a pair of inverted repeats of 25,221 bp. Totally 133 genes were annotated, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. We also detected two pseudo-genes (ycf1 and rps19). The overall GC content of the whole genome is 37.7%. The phylogenetic tree based on 23 complete plastomes indicated that S. wettsteiniana was closely related to S. involucrata of Compositae.
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spelling pubmed-82050822021-06-24 The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae) Luo, Deng-Li Zhang, Ying-Min Zhang, Ti-Cao Li, Guo-Dong Mitochondrial DNA B Resour Mitogenome Announcement Saussurea wettsteiniana is a medicinally important herb endemic to Hengduan Mountains. Here, we report and characterize the complete chloroplast genome sequence of S. wettsteiniana to provide genomic resources useful for future study. The complete chloroplast genome is 152,631 bp in length, consisting of a large single copy and a small single copy of 83,552 bp and 18,637 bp, which were separated by a pair of inverted repeats of 25,221 bp. Totally 133 genes were annotated, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. We also detected two pseudo-genes (ycf1 and rps19). The overall GC content of the whole genome is 37.7%. The phylogenetic tree based on 23 complete plastomes indicated that S. wettsteiniana was closely related to S. involucrata of Compositae. Taylor & Francis 2021-06-14 /pmc/articles/PMC8205082/ /pubmed/34179496 http://dx.doi.org/10.1080/23802359.2021.1939178 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Luo, Deng-Li
Zhang, Ying-Min
Zhang, Ti-Cao
Li, Guo-Dong
The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title_full The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title_fullStr The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title_full_unstemmed The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title_short The complete chloroplast genome and phylogenetic analysis of Saussurea wettsteiniana (Compositae)
title_sort complete chloroplast genome and phylogenetic analysis of saussurea wettsteiniana (compositae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205082/
https://www.ncbi.nlm.nih.gov/pubmed/34179496
http://dx.doi.org/10.1080/23802359.2021.1939178
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