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The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication
With about 153 species, the genus Androsace (Primulaceae) is known for its horticultural and economic importance. In this study, we report the complete chloroplast genome of Androsace erecta Maximowicz, a morphologically distinct species of Sect. Orthocaulon native to the Western China. The plastome...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205085/ https://www.ncbi.nlm.nih.gov/pubmed/34179490 http://dx.doi.org/10.1080/23802359.2021.1938723 |
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author | Peng, Chuan Yu, Chih-Chieh Xing, Yao-Wu |
author_facet | Peng, Chuan Yu, Chih-Chieh Xing, Yao-Wu |
author_sort | Peng, Chuan |
collection | PubMed |
description | With about 153 species, the genus Androsace (Primulaceae) is known for its horticultural and economic importance. In this study, we report the complete chloroplast genome of Androsace erecta Maximowicz, a morphologically distinct species of Sect. Orthocaulon native to the Western China. The plastome of A. erecta is highly conserved in genome size, structure, and content when compared to all previously published plastomes of the genus. The phylogenomic analysis strongly supported A. erecta as sister to a clade comprising species of Sections Aizoideia and Chamaejasme. Lastly, we selected the four most variable regions across the Androsace species plastomes (trnK(UUU)-rps16, trnS(GCU)-trnG(UCC), psbE-petL, and infA-rps8), which were considered to be suitable candidate DNA barcodes for Androsace. |
format | Online Article Text |
id | pubmed-8205085 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82050852021-06-24 The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication Peng, Chuan Yu, Chih-Chieh Xing, Yao-Wu Mitochondrial DNA B Resour Mitogenome Announcement With about 153 species, the genus Androsace (Primulaceae) is known for its horticultural and economic importance. In this study, we report the complete chloroplast genome of Androsace erecta Maximowicz, a morphologically distinct species of Sect. Orthocaulon native to the Western China. The plastome of A. erecta is highly conserved in genome size, structure, and content when compared to all previously published plastomes of the genus. The phylogenomic analysis strongly supported A. erecta as sister to a clade comprising species of Sections Aizoideia and Chamaejasme. Lastly, we selected the four most variable regions across the Androsace species plastomes (trnK(UUU)-rps16, trnS(GCU)-trnG(UCC), psbE-petL, and infA-rps8), which were considered to be suitable candidate DNA barcodes for Androsace. Taylor & Francis 2021-06-14 /pmc/articles/PMC8205085/ /pubmed/34179490 http://dx.doi.org/10.1080/23802359.2021.1938723 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Peng, Chuan Yu, Chih-Chieh Xing, Yao-Wu The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title | The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title_full | The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title_fullStr | The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title_full_unstemmed | The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title_short | The complete chloroplast genome of Androsace erecta (Primulaceae) and its phylogenetic implication |
title_sort | complete chloroplast genome of androsace erecta (primulaceae) and its phylogenetic implication |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8205085/ https://www.ncbi.nlm.nih.gov/pubmed/34179490 http://dx.doi.org/10.1080/23802359.2021.1938723 |
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